Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01553 ATGTCTGACTACATGCAGATATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGAGTTGCCATCGCTGGTGCCCTGGCTGAAGCTTGTAAAGTTCTTTTGATGGATGAACTCAAAACGTTCTTGGATGAAAAAGACCAGATAGTGTACTTTGCTGCACTTTTTGTCACCCATCGTTTGGAAGAACTGGAGTATGCAGATGGTGCAATCAACATGGAGGACGGGAAAGTTGTCAAGCATGGAGATGACACAAGCATAAGGAGTTTCATTGAAGCCAGGCAATCGTTTTATATCgaacaaattaattcttg 311 0.418 MSDYMQISVQTLSGGQKQRVAIAGALAEACKVLLMDELKTFLDEKDQIVYFAALFVTHRLEELEYADGAINMEDGKVVKHGDDTSIRSFIEARQSFYIEQINS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01553 103 Pfam ABC transporter 8 37 IPR003439 GO:0005524
Bva05g01553 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 90 IPR027417 -
Bva05g01553 103 Gene3D - 2 102 IPR027417 -
Bva05g01553 103 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 1 102 - -
Bva05g01553 103 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01553 Bva-Chr5 12784990 12785848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01553 12 86 Calmodulin-binding Proteins AT2G36910 36.471 2.55e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01553 - - gmx:100813654 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01553 05 12784990 12785848 Bva05g01553 05 12784990 12785848 ECH