Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01544 ATGGGAGATGGAAATGTGAAGCTACCTCCTGGCTTTCAGTTCTGTCCCACAGACGAGGAACTTAtccttcactttctctcttccAGGGCTAATCATTTTTCATCCGATCCCAATATCATTCCTGATCTTGATCTCTCTCGGCTTCATCCTTGGGAATTAAATGAACCAGTGCTCTCAGCAGCTCACAGTAACAAGAAAGTGGGAATCAAGAAAAACCTAATCTTCAACATTGGGGAACCTCCATTTGCCACTGAAACCGGTTGGATAATGCAAGAATATCATCTTTGCTACCCTTCTTCATCTGATGAGAGCCAATGGATTTTGTGCCGAGTGTATGAAAGGAATAGAGATTCTGACGATGCAATGTGGTATAATAGCGATGACGATGGCAGCGGAACAGAAGTTTCGTGGCTAGACGAAGTATTTTTGTCTTTGGATGATGATCATGATCTTCAGGAAATAACCGATTACTG 473 0.408 MGDGNVKLPPGFQFCPTDEELILHFLSSRANHFSSDPNIIPDLDLSRLHPWELNEPVLSAAHSNKKVGIKKNLIFNIGEPPFATETGWIMQEYHLCYPSSSDESQWILCRVYERNRDSDDAMWYNSDDDGSGTEVSWLDEVFLSLDDDHDLQEITDY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01544 157 PANTHER NAC TRANSCRIPTION FACTOR 56 53 150 - -
Bva05g01544 157 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 59 - -
Bva05g01544 157 Gene3D NAC domain 59 119 IPR036093 GO:0003677|GO:0006355
Bva05g01544 157 PANTHER NAC TRANSCRIPTION FACTOR 56 2 59 - -
Bva05g01544 157 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 53 150 - -
Bva05g01544 157 ProSiteProfiles NAC domain profile. 1 114 IPR003441 GO:0003677|GO:0006355
Bva05g01544 157 Gene3D NAC domain 17 58 IPR036093 GO:0003677|GO:0006355
Bva05g01544 157 Pfam No apical meristem (NAM) protein 9 55 IPR003441 GO:0003677|GO:0006355
Bva05g01544 157 SUPERFAMILY NAC domain 6 113 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01544 Bva-Chr5 12744846 12745606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01544 6 126 NAC Transcription Factor Family AT1G52890 29.448 2.41e-21 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva05g01544 NAM 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01544 - - gmx:100170711 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01544 05 12744846 12745606 Bva05g01544 05 12744846 12745606 ECH