Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01528 ATGCCGGAACTTCGTAGAGGAGTCCGACGCGGACGTGCTACGGTAGGGAAGAAGATTTCGGAGCCGCCGACGCCAGGGAAATACGTGAAGACTCGTGCTGCCGTCGCAAGGGAAGTAGTGGAGGCGAAGGTTAGGCCCAGGACTCGATTGGCGGCGAAGAAGTTGAAGGAGGAGAAGCCGGTGGTTGAGATATTAGAGACCGTGAAGAATTTGAAGGAAGAGAAGCCGGTGATTGTTATATCGGAAGCCGACAGTGATATAGAACGCGTGAAGGGAAAGAAGGGTAAAGAAGAGGTCGAAGACGTCATGGGTGATGATAGTGGTGGTTTGAGTGCTAATAAGGCTGCTGGGCAGGAGGATGAGGGAAACACTCCACCTTTCCCCGACAAgGTTCAAGTCGGAGGATCACCTGCATATAAAGTAGACAGGAAACTGGGTAAAGGTGGGTTCGGTCAAGTTTTTGTTGGCCGTCGCATTTCTGGTGGTAATGACCGAACAATGGGTGCTGGTGCTACTGAGGTGGCTTTGAAATTTGAACACCGAAACAGTAAGGGCTGCAACTACGGTCCTCCTTATGAGTGGCAAGTGTACAACACTCTTGGTGGTAGTTATGGAATACCTAAAGTACATTATAAAGGAAGACAAGGAGAGTATTATGTAATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTCTGGAACAACTCAGGCCAGACGATGTCAGCAGAAATGATTGGATGTATAGCAGTTGAGTCCTTATCAATCCTAGAGAAGATGCACTCAAGGGGTTATGTCCATGGAGATGTAAAACCAGAGAACTTTCTACTGGGTCAGCCATCTACAGcacaagagaagaaattgtttCTTGTTGACCTCGGATTAGCAACCAAGTGGAGAGACACATCCAGTGGGCAGCATGTTGAATATGATCAACGCCCTGATATGTTTAGAGGGACTGTTCGATATGCTAGTGTTCACGCTCATTTGGGAAGAACTGCTAGTCGAAGGGATGATCTTGAATCTCTTGCATATACACTCATCTTTCTGCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGTGATAACAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACGTCTCCTGAGATGATGTGCTGCTTCTGCCCTAGTCCTCTTAAGCAATTTCTTGAGATTGTAGTGAACATGAAATTTGATGAAGAACCTAACTATGCAAAACTCATATCATTATTTGATGCTATGATTGGGCCACCAGCATTACGACCACTTAACACTGATGGTGCTTCAAAGGTTGGGCAAAAGCGTGGTAGGTTGAATGTTGAAGAAGAGGATGATGGACAGCCCAAGAAGAAGGTTCGATTAGGGGTGCCTGCCACACAATGGATTTCAGTTTACAATGCAAGACAACCAATGAAGCAAAGGTACCATTACAATGTGGCTGATGCACGATTAGCACAGCACGTGGAGAGAGGAATTGCTGATGGTCTCCTTATCAGTTGTGTGGCATCTTGTTCCAATCTTTGGGCACTTATTATGGATGCTGGAACTGGTTATACGAGTCAAGTTTACAAGCTGTCACCTTTATTCTTACACAAGGATTGGATAATGGAGCAGTGGGAGAAGAACTATTACATTACTTCTATTGCTGGGGCCAATAATGGCAACTCTCTTGTGGTTATGTCAAAAGGAACACAGTATACCCAACAATCATACAAAGTGAGCGATTCCTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGATTTCATGTGACCTCGATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGAAATGCTGGATTCAGTGATCAGGTGGTTGAACTGGATTTTCTCTATCCAAGTGAGGGAATCCACAGACGATGGGACAATGGTTACAGGATAACATCAACAGCTGCTACATGGGATCAATCTGCCCTTATATTAAGCATTCCCAGGCGCAGGCCCGGCGATGAAACTCAGGAAACTTTGCGTACATCTCAATTTCCGAGTACACATGTTAAGGAAAAATGGTCTAAAAACCTTTATCTCGCTTGTTTGTGCTATGGGCGCACAGTTGCTTG 2102 0.4529 MPELRRGVRRGRATVGKKISEPPTPGKYVKTRAAVAREVVEAKVRPRTRLAAKKLKEEKPVVEILETVKNLKEEKPVIVISEADSDIERVKGKKGKEEVEDVMGDDSGGLSANKAAGQEDEGNTPPFPDKVQVGGSPAYKVDRKLGKGGFGQVFVGRRISGGNDRTMGAGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSYGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNNSGQTMSAEMIGCIAVESLSILEKMHSRGYVHGDVKPENFLLGQPSTAQEKKLFLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMMCCFCPSPLKQFLEIVVNMKFDEEPNYAKLISLFDAMIGPPALRPLNTDGASKVGQKRGRLNVEEEDDGQPKKKVRLGVPATQWISVYNARQPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGYTSQVYKLSPLFLHKDWIMEQWEKNYYITSIAGANNGNSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01528 700 ProSiteProfiles Protein kinase domain profile. 139 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01528 700 Pfam Protein kinase domain 139 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01528 700 CDD STKc_CK1 139 414 - -
Bva05g01528 700 Gene3D Transferase(Phosphotransferase) domain 1 112 456 - -
Bva05g01528 700 MobiDBLite consensus disorder prediction 91 132 - -
Bva05g01528 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Bva05g01528 700 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 93 671 - -
Bva05g01528 700 MobiDBLite consensus disorder prediction 1 27 - -
Bva05g01528 700 ProSitePatterns Protein kinases ATP-binding region signature. 145 177 IPR017441 GO:0005524
Bva05g01528 700 SMART serkin_6 139 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01528 700 MobiDBLite consensus disorder prediction 1 16 - -
Bva05g01528 700 PANTHER CASEIN KINASE-RELATED 93 671 - -
Bva05g01528 700 MobiDBLite consensus disorder prediction 438 452 - -
Bva05g01528 700 SUPERFAMILY Protein kinase-like (PK-like) 139 416 IPR011009 -
Bva05g01528 700 MobiDBLite consensus disorder prediction 428 452 - -
Bva05g01528 700 Coils Coil 699 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01528 Bva-Chr5 9711353 9718265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01528 257 414 MAP Kinase Kinase Kinase AT5G50180 25.000 3.00e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bva05g01528 Pkinase 4.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01528 - - gmx:100819969 1216.06