Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01516 ATGCTGGGCTACTTATCACACAATGAAATGGTGGTGCAGGTAGAGGGAAGGACTTGTGAGGCACCGAGTGGTAAGTTCACTGGTCCGTGCATCGTGTCCATTTCCAATCCAAATTGCAACAATGTTTGCAAGAACGAGGAGCGTTTGCTTAGTGGCATATGCAAGAAAGATCTTCGCTGCTATTGCACCAGAAACTGTTG 200 0.47 MLGYLSHNEMVVQVEGRTCEAPSGKFTGPCIVSISNPNCNNVCKNEERLLSGICKKDLRCYCTRNC 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01516 66 PANTHER DEFENSIN 9 66 - -
Bva05g01516 66 SUPERFAMILY Scorpion toxin-like 17 66 IPR036574 -
Bva05g01516 66 Pfam Gamma-thionin family 17 66 - -
Bva05g01516 66 PANTHER DEFENSIN-LIKE PROTEIN 1 9 66 - -
Bva05g01516 66 SMART gth_4 18 66 IPR003614 GO:0006952
Bva05g01516 66 Gene3D - 17 66 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01516 Bva-Chr5 9378459 9379072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01516 12 66 Plant Defensins Gene Families AT2G02130 51.786 2.52e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01516 - - pvu:PHAVU_005G071400g 67.0106