Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01473 ATGAAGCCTCTCAAGCCAAAGATTTTCTCGATGAGTCATGTTTACAGTCAATTCTTACTTCTGTTCTCTTTGAGTTTGATATCACTGCTGCCTATTCCTACCACACGAGCACAAACAAATCAGACTGACAAAATGGCATTgctcaaatttaaagaatcCATAACCAACGATCCACATGGAGTAGTAGGCTCTTGGAATGACTCAACTCACTTCTGCAGTTGGGTTGGAGTAACATGTGGCCGGAAGCACCAGAGAGTTACAGCTTTGAAACTAGAGGGCACTGATTTAGGTGGACCGATATCACCTTTTATTGGGAACCTCTCTTTTCTTAGATCCATCATGCTCCGCAATAACAGTTTGTCTGGCCATATTCCGCAGGAAGTTGGACGTTTGTTTCGTCTACAACTATTTTTGCTTTGGAATAACACGCTCAGTGGAGAAATTCCAACAAGCTTGGGTAATTGCTCTCAACTCAGAATCATTGACTTGTCGGCCAATCTGTTGACAGGGCCTATACCTATGGAGTTTGGGTCTTTAATTAATCTTCAAGAACTTTACCTGGAAAGGAATATTCTCACAGGTGGCCTGCCAACCTCCTTAGGGAATATTTCATGGCTGGTAATATTTTCTGTAGCGATTAATAGTTTGGAGGGAGCTATTCCACATGAAATTGGGCATTTGGAAAGGTTATCCATGTTCGAAATTGGCCTTAATAACCTCTCAGGTATTATACCTTATTCTCTCTACAATATTTCCTCTATGACCATATTGTCAATTCCGGCAAACCAGCTGAGTGGCAATTTGCCACGCTACATAGGCATCACTTTATCAAAATTGCAATTTCTTGAATATGGTCTTAATAAGCTATCTGGATCAATTCCGGAATCATTATCCAATATTTCTGGTCTTCAAACAATTGACTTAGctggtaataattttatggGATCAGTTCCAACCAATTTGGGAAACCTTCGAGAGCTATCCATTCTAGGTTTAGGTCACAATAATTTGGGACACAACTCACAGAAAGACTGGGATTTCTTGAATTCTCTGATAAACTGCAGCAAACTGGAATATCTTGGTCTCCGTGTGAACAATTTTGGAGGTAATCTGCCCAAAGCTGTTGGAAATCTCTCACATCAACTAATGAGACTCGAATTAAATTCCAATAACATACATGGCTCCATTCCTGCTGAAATCACAAGTCTAAGAAATTTACTCTCATTGGACTTGCGGAATAACTCTCTCACAGATTTGCATCTGCCATTATGCTCTACCGGTGGTTCAAAACGGGTAAAGAAGCATGTTCTTAAGTTAAGAATCATAGTCATTTGCTtggttcttttcttcttcctgttGGCTGCTTCATTCGCTATATTTTGgataagaaaaagtaaaaggaaaacatcTACCTTCTCAGCATTTGAGGGGCTTCTCCAGGTTTCTTACAGAAGGATTCTGGAAGCAACCGGTGGTCTTTCACCCAATAACTTGATAGGAGTGGGTAGTTTTGGTTCTGTATACAAAGGAACTTTTGACTCAGAGGAAAGAGTAGTAGCTGTGAAGGTTCTCAACCTACAACGGAAAGGAGCTACCAAGAGTTTCTTGGCTGAATGCAATGCCTTGAAAAGAGTCAAGCATCGAAACCTTGTCAAAGTTTTGACTTGCTGCTCAAGCGTCGATTACAATGGAAATGATTTCAAAGCTCTAGTTTTCGAATTCATGGTAAATGGAAGCTTGGAGAAATGGATACATCCGGAGCCAGGTGAAAACCACTCATTAGACTTTCTTCAGAGACTAAATGTTTCAATAGATGTGGCTTCTGCATTGCAATATCTTCACCGTGAATGTGAACAACCAATTGTTCACTGTGACTTAAAGCCTAGTAATGTTCTTCTTGATTCTGCCCTTGTGGCTCATGTGAGTGATTTCGGTTTGGCAAGACTTCTCTCGACTTCTAATCAAGTTTCTGAAGGTAAATCTAGCACCATTGGATTGAAGGGCTCCGTGGGGTATGCAGCTCCAGAATATGGCATTGGAGGAGAAGCTTCAAAGGAGGGTGATGTCTATAGCTTTGGGATCCTTCTGTTAGAGATATTCACTGGAAAGAGACCCACTGAGGAGATGTTCATGGATGACTTTAATCTTCACAGTTATGTGAAAGTTGCGTTAGCTGAAAAGCTTTTGCAGGTTATAGACCCCATTCTTGCCCTTGAAGGAAtagaagaacaaaatggagAGACTAGTAGCTATCAAACTCAGTTGTCTCGTAACATTCAAAAGTGTATTCTTTCAGTTTTGGAGGTCGGACTTACTTGCTCTAAAGAGTCTCCAGaggaaagaatgaaaattgagGATGCCACCCGGCGATTGCAAATGATCAAGAGAACCTTTCtgttagaata 2405 0.3896 MKPLKPKIFSMSHVYSQFLLLFSLSLISLLPIPTTRAQTNQTDKMALLKFKESITNDPHGVVGSWNDSTHFCSWVGVTCGRKHQRVTALKLEGTDLGGPISPFIGNLSFLRSIMLRNNSLSGHIPQEVGRLFRLQLFLLWNNTLSGEIPTSLGNCSQLRIIDLSANLLTGPIPMEFGSLINLQELYLERNILTGGLPTSLGNISWLVIFSVAINSLEGAIPHEIGHLERLSMFEIGLNNLSGIIPYSLYNISSMTILSIPANQLSGNLPRYIGITLSKLQFLEYGLNKLSGSIPESLSNISGLQTIDLAGNNFMGSVPTNLGNLRELSILGLGHNNLGHNSQKDWDFLNSLINCSKLEYLGLRVNNFGGNLPKAVGNLSHQLMRLELNSNNIHGSIPAEITSLRNLLSLDLRNNSLTDLHLPLCSTGGSKRVKKHVLKLRIIVICLVLFFFLLAASFAIFWIRKSKRKTSTFSAFEGLLQVSYRRILEATGGLSPNNLIGVGSFGSVYKGTFDSEERVVAVKVLNLQRKGATKSFLAECNALKRVKHRNLVKVLTCCSSVDYNGNDFKALVFEFMVNGSLEKWIHPEPGENHSLDFLQRLNVSIDVASALQYLHRECEQPIVHCDLKPSNVLLDSALVAHVSDFGLARLLSTSNQVSEGKSSTIGLKGSVGYAAPEYGIGGEASKEGDVYSFGILLLEIFTGKRPTEEMFMDDFNLHSYVKVALAEKLLQVIDPILALEGIEEQNGETSSYQTQLSRNIQKCILSVLEVGLTCSKESPEERMKIEDATRRLQMIKRTFLLE 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01473 801 Gene3D Phosphorylase Kinase; domain 1 456 574 - -
Bva05g01473 801 SUPERFAMILY Protein kinase-like (PK-like) 470 793 IPR011009 -
Bva05g01473 801 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 417 799 - -
Bva05g01473 801 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 373 417 - -
Bva05g01473 801 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 371 - -
Bva05g01473 801 Gene3D Ribonuclease Inhibitor 276 343 IPR032675 -
Bva05g01473 801 Gene3D Ribonuclease Inhibitor 40 198 IPR032675 -
Bva05g01473 801 Gene3D Ribonuclease Inhibitor 204 275 IPR032675 -
Bva05g01473 801 SUPERFAMILY L domain-like 337 421 - -
Bva05g01473 801 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 417 799 - -
Bva05g01473 801 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 373 417 - -
Bva05g01473 801 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 10 371 - -
Bva05g01473 801 Gene3D Ribonuclease Inhibitor 344 431 IPR032675 -
Bva05g01473 801 Gene3D Transferase(Phosphotransferase) domain 1 575 798 - -
Bva05g01473 801 SMART serkin_6 493 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01473 801 SUPERFAMILY L domain-like 38 337 - -
Bva05g01473 801 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Bva05g01473 801 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Bva05g01473 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Bva05g01473 801 Pfam Protein tyrosine and serine/threonine kinase 497 713 IPR001245 GO:0004672|GO:0006468
Bva05g01473 801 ProSiteProfiles Protein kinase domain profile. 493 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01473 Bva-Chr5 8566052 8569232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01473 89 799 Receptor kinase-like Gene Family AT3G47570 39.973 5.03e-157 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva05g01473 PK_Tyr_Ser-Thr 7.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01473 - - tss:122639054 675.241