Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01470 ATGGTGAACAGAATGGAATGGGAGAAGCATCATAATCATCAACAACTGCAGCAACAGGAGCTGCTGCAGCAAAAGCGAGACGGTTTGCAGAGTGTGAATGTGAATGGGAACTGTGCTGGGATGATGATGTGTGTGAAGGTGATGACTGATGAGCAATTGGAAACTCTCAGAAAGCAAATCGCAGTTTATGCTGTCATTTGTGAGAGACTCGTTGAATTGCACAAGCAATTCATCGCTCAGCAGGATTTTGCAgGAGCTAGGCTGGGAAACATGTACTGTGACCCATTGATAGCATCTGTTGGGCACAAGATAACTTCAAGACAGCGATGGACTCCAACACCTGTGCAGCTTCAGATCTTAGAGCGAATATTCGATCAGGGGATTGGAACTCCAAACAAACTGAAGATCAAGGAGATTACTGCTGAACTGAGCCAGCATGGTCAAATTTCTGAAACAAATGTCTACAATTGGTTCCAGAATAGGCGAGCTCGGTCCAAAAGAAAGCAGCAAAATGTGGGTCCTAGCAATGCTGAATCAGAAGTAGAGACTGAAGGTGAGTCAATCAAGGATAAGAAGACAAAACCAGAGGAGTTTCAGTCCCAAAATAGCGGAAATTCAAGGACTGAAGATTTGTGCTTGCAGAACTCTGAAGTATCCTCTGAGTTGCACTACTTGACTCCACAATCTGATGGACTGAACTCCATTTTTTCATCTGATGGCAGTCTTAAATCTGCTAGAGGTTATAATCAAATGTCTGCTTTCGAGGGGATGCTGTCAAACTCAAGGGGTGACTACATCACTGGGAAAATGGAAATGCCAACAAGCTACGGTTTATATCCGCAAGCCGGAGACTATAACATGACGGGTTG 869 0.4419 MVNRMEWEKHHNHQQLQQQELLQQKRDGLQSVNVNGNCAGMMMCVKVMTDEQLETLRKQIAVYAVICERLVELHKQFIAQQDFAGARLGNMYCDPLIASVGHKITSRQRWTPTPVQLQILERIFDQGIGTPNKLKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVGPSNAESEVETEGESIKDKKTKPEEFQSQNSGNSRTEDLCLQNSEVSSELHYLTPQSDGLNSIFSSDGSLKSARGYNQMSAFEGMLSNSRGDYITGKMEMPTSYGLYPQAGDYNMTG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01470 289 Gene3D - 109 172 - -
Bva05g01470 289 SMART HOX_1 105 172 IPR001356 GO:0003677
Bva05g01470 289 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 288 IPR044559 GO:0003700
Bva05g01470 289 Pfam Homeodomain 107 167 IPR001356 GO:0003677
Bva05g01470 289 MobiDBLite consensus disorder prediction 165 210 - -
Bva05g01470 289 PANTHER - 3 288 - -
Bva05g01470 289 MobiDBLite consensus disorder prediction 182 197 - -
Bva05g01470 289 SUPERFAMILY Homeodomain-like 106 170 IPR009057 -
Bva05g01470 289 CDD homeodomain 107 169 IPR001356 GO:0003677
Bva05g01470 289 ProSiteProfiles 'Homeobox' domain profile. 103 168 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01470 Bva-Chr5 8521082 8524145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01470 29 289 Wox Gene Family AT4G35550 51.246 6.82e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva05g01470 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01470 - - qsu:112005537 378.637