Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01459 ATGGAGGAACAGGCTGTCAATAGGAGTTTGCTGCTGAAGGAGAAGGAGGAATCGGTGATAACAAACCGGCCTGAGACGGATTCGGTGGTGGAAGTTCGGGGCTCTGACTGTTCGGTAGGCCTGGAGTGCTTACTGAACGTTGTCAGAGCCCTGGGGATGGGATCATGCCTCTCAGGGGATGGGACTGATGCCAATGCTCCGCCTTATGGGGCGGAAACTGCTTCTTCGGATGGTGCGAGATTGAGGAGGAGATTGATGAAGTCATCTTCGATGGAATTAAGGCTGCACGGAGTTCCTGGGAGAATGTTCTTAAATGGATCTAGTGAGGTTGCATCCTTGTTTTCTAAGCAAGGAAAAAAAGGGATCAACCAGGATGCTATGCTTGTTTGGGAGaACTTCTGTTCAAAGCAGGACATTATATTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAGAGAGTCAGggattcttttcctttaaagCTTAGTGCTCAACTGGAATGGCATTACAAGAACGAAAATGGAGTCAGTGATACTGGCAGTCCTTTGGGAACTTATAAGTTTGAAGAGATTGgtttcaaaaaaattgataggaAAACTTCTGCCCCCGATCAGGTGCATAATGTCTTTGAGAGAACTTTCAAGACACTGAAAGAATCATTTCTGAAAGCTGCTAAGGTTATGGACAAGGAACTGAAACTACATCCTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCATGGGCAAGTTATCGTTATTGGAAATGTTGGGGACTCGAGAGCCATATTGGGTACCAGAGACCATAACGGTTCCCTTACTGCTGTCCAGTTGACCATTGATCTTAAGCCAAATCTTCCAAAGGAAGCAGAAAGGATCAATCTTTGTAAAGGAAGGGTCTTTGCTCTTCAAAATGAACCTGATGTTGCTCGAGTTTGGCTGCCTCATGCTAATTCCCCAGGCCTTGCTATGGCGCGGGCCTTTGGAGATTTTTGCCTAAAGGACTTCGGCCTGATATCTGTTCCCGATATCTCATATCACCGCATTACAGAAAAGGATGAATTTATTGTGTTAGCCACAGATGGGATTTGGGATGTTTTATCAAACCAAGAAGTCGTAGACATCGTGGCAGCTTCTCCACGATCTTCTGCAGCTCGAACCCTGGTTGAGGTTGCTGTTCGAACTTGGAGGACGAAGTATCCTACTGCCAAGGTTGATGATTGTGCTGTTGTTTGCCTCTTCCTCCACTCGGATTCTGACAAGTCAGCATACTCTTTGGCCGAGGAATCACTGCAGGCCTCTGTTGATAAATCCAACATTACCACCACGGAAGCTGCTGCCGATTCTGTAGTCAACTGTTCAAGATTGGCTAGAACTGCCCCCGAGAGTGCACCTCTACTAGGGGAGGAAACAGTAGGAGTGTA 1454 0.4546 MEEQAVNRSLLLKEKEESVITNRPETDSVVEVRGSDCSVGLECLLNVVRALGMGSCLSGDGTDANAPPYGAETASSDGARLRRRLMKSSSMELRLHGVPGRMFLNGSSEVASLFSKQGKKGINQDAMLVWENFCSKQDIIFCGVFDGHGPYGHRVAKRVRDSFPLKLSAQLEWHYKNENGVSDTGSPLGTYKFEEIGFKKIDRKTSAPDQVHNVFERTFKTLKESFLKAAKVMDKELKLHPDIDCFCSGTTAVTLIKHGQVIVIGNVGDSRAILGTRDHNGSLTAVQLTIDLKPNLPKEAERINLCKGRVFALQNEPDVARVWLPHANSPGLAMARAFGDFCLKDFGLISVPDISYHRITEKDEFIVLATDGIWDVLSNQEVVDIVAASPRSSAARTLVEVAVRTWRTKYPTAKVDDCAVVCLFLHSDSDKSAYSLAEESLQASVDKSNITTTEAAADSVVNCSRLARTAPESAPLLGEETVGV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01459 484 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 53 435 - -
Bva05g01459 484 SMART PP2C_4 99 423 IPR001932 -
Bva05g01459 484 Gene3D - 106 428 IPR036457 -
Bva05g01459 484 SUPERFAMILY PP2C-like 110 426 IPR036457 -
Bva05g01459 484 Pfam Protein phosphatase 2C 218 405 IPR001932 -
Bva05g01459 484 PANTHER ALPHABET, ISOFORM E-RELATED 53 435 - -
Bva05g01459 484 CDD PP2Cc 110 425 IPR001932 -
Bva05g01459 484 ProSiteProfiles PPM-type phosphatase domain profile. 110 425 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01459 Bva-Chr5 8306522 8310421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01459 79 456 PP2C-type Phosphatase Gene Family AT1G16220 55.928 1.52e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01459 - - gmx:100802479 572.392