Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01450 ATGGGGAATTGTTGGTGTAGAAGGGAACCCTCTGTTTACAAAGTTTCATCCAATGCAAAGTCAGAATCACCAAGTGCAATCAAACAACGGATTGATGATAGTAAGTTACCATCCAATCCTGAAGAAGTAGAAGACCTGCGCCGTGATTCTGCTACAAATCCGTTGATTGTATTCACTTATGATGAACTAAAGATAATCACTAAAAATTTTAGGCAAGATCATTTCTTGGGAGGAGGAGGATTTGGGAGGGTTTATAAAGGGTTTATTTCTGAGGATGTAAGTAAGCGGCTTCCCCCTCTTCCTGTTGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCATAGAGAATGGCTGGCAGAAGTTATATTTTTGGGGCAGCTTTCTCATCCAAATTTAGTCAAATTGATCGGATACTGCTGCCAAGATGAGCATAGAGTGCTAATATATGAGTATATGGCCCGGGGTAGTGTGGAAAACAATCTATTCTCCAAAGTATTGCTTCCTTTGCCATGGTCAGTGAGAATGAAGATTGCATTTGGAGCTGCAAAGGGCCTGGCATTTCTTCATGATGCAGAGAAACCTGTCATCTATCGTGATTTCAAgacatcaaatattttgttggaCCCGGACTTCAATGCAAAACTTTCTGACTTCGGCCTTGCTAAAGATGGACCAGTTGGGGACAACTCTCATGTCTCCACTCGCATAATAGGAACATATGGATATGCTGCGCCCGAATATATAATGACAGGTCATCTTACCTCTAGAAGTGATGTTTATAGCTTTGGAGTTGTTCTTCTCGAATTTTTAACCGGAAGAAAATCTTTAGATAAGTCAAGACCTGGAAGGGAACAAAACCTCACAGATTGGGCTATTCCTTTGCttaaggagaagaagaaatttctaAACATCATTGATCCAAGGCTAGAAGGAGACTATCCTGTAAAAGGAGTTCACAGGGCTGCAATGTTAGCTTATCATTGCTTGAACCGCAATCCCAAAGCGAGGCCTCTAATGCGAGACATAGTTGATTCTCTGGAGCCTTTGCAGCTCTATAATGAGGTTTCTATTGGAAAAACATTGACCATAATCAGTGAGGTTCCTGAAGctgaattaaaaagaaaagatacacAGCACTA 1145 0.3939 MGNCWCRREPSVYKVSSNAKSESPSAIKQRIDDSKLPSNPEEVEDLRRDSATNPLIVFTYDELKIITKNFRQDHFLGGGGFGRVYKGFISEDVSKRLPPLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCQDEHRVLIYEYMARGSVENNLFSKVLLPLPWSVRMKIAFGAAKGLAFLHDAEKPVIYRDFKTSNILLDPDFNAKLSDFGLAKDGPVGDNSHVSTRIIGTYGYAAPEYIMTGHLTSRSDVYSFGVVLLEFLTGRKSLDKSRPGREQNLTDWAIPLLKEKKKFLNIIDPRLEGDYPVKGVHRAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLYNEVSIGKTLTIISEVPEAELKRKDTQH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01450 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Bva05g01450 381 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01450 381 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Bva05g01450 381 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Bva05g01450 381 MobiDBLite consensus disorder prediction 17 46 - -
Bva05g01450 381 SUPERFAMILY Protein kinase-like (PK-like) 44 348 IPR011009 -
Bva05g01450 381 Gene3D Phosphorylase Kinase; domain 1 31 153 - -
Bva05g01450 381 Gene3D Transferase(Phosphotransferase) domain 1 154 363 - -
Bva05g01450 381 MobiDBLite consensus disorder prediction 26 46 - -
Bva05g01450 381 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 10 361 - -
Bva05g01450 381 PANTHER OS01G0588500 PROTEIN-RELATED 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01450 Bva-Chr5 8136148 8141503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01450 27 348 Glycoside Hydrolase AT3G07070 49.699 8.40e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva05g01450 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01450 - - gmx:100775722 664.07