Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01435 atgCGCTGCCATGGATTAGCTGCAATCTCAGGGAGCGAGAATCGCTTCCTGTGTCTACCCGCCGCAAACCCAAAacctttctccttttctgcCCACAGATCAAAACCCCTCAAATTCCCTTCCCGAATCGGTTTTGTTTCCCTCAGAGCTAAAGCCGCCGTGAACGATGGCTTCGTGACGGCGGCCCCCGCTGAGCTCAGCTTTTACGAGCTTCTGGGTATATCGGAATCGGGGTCGTTGCCCGAAATCAAGCAAGCGTATAAGCAACTGGCACGGAAGTATCACCCGGATGTGTCTCCTCCGGATCGGGTCGAGGAGTATACGAAGAGGTTTATTCAGGTGCAGGAGGCCTACGAGACCTTGTCTGATCCGAGAAGGAGAGCTATTTATGATAGAGACATGGCGTCAGGCCTTCACCTCGCATTCTCTGCTCGCCGGCGATATTACGACGATGAGGTAATTGAACAGAGAAGTGAGTGGAAAAACCGGTGGCAATCTCAGCTGTCGGAGCTGAAGAGAAAAAGCAAGTACAAGGATGCCGGAGGAAACATGTCGTGGGCCTCTCGAATGCGGCGGAGAAGGGAGGAACAACAATCAGATTA 602 0.5116 MRCHGLAAISGSENRFLCLPAANPKPFSFSAHRSKPLKFPSRIGFVSLRAKAAVNDGFVTAAPAELSFYELLGISESGSLPEIKQAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPRRRAIYDRDMASGLHLAFSARRRYYDDEVIEQRSEWKNRWQSQLSELKRKSKYKDAGGNMSWASRMRRRREEQQSD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01435 200 SUPERFAMILY Chaperone J-domain 65 141 IPR036869 -
Bva05g01435 200 CDD DnaJ 68 123 IPR001623 -
Bva05g01435 200 Pfam DnaJ domain 68 131 IPR001623 -
Bva05g01435 200 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 1 198 - -
Bva05g01435 200 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 1 198 - -
Bva05g01435 200 MobiDBLite consensus disorder prediction 174 200 - -
Bva05g01435 200 Gene3D DnaJ domain 60 160 IPR036869 -
Bva05g01435 200 SMART dnaj_3 66 126 IPR001623 -
Bva05g01435 200 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Bva05g01435 200 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva05g01435 200 PRINTS DnaJ domain signature 126 145 IPR001623 -
Bva05g01435 200 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva05g01435 200 PRINTS DnaJ domain signature 106 126 IPR001623 -
Bva05g01435 200 ProSiteProfiles dnaJ domain profile. 67 134 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01435 Bva-Chr5 7938664 7940667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01435 69 131 C2H2 Transcription Factor Family AT1G74250 45.455 3.13e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01435 - - zju:107422310 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01435 05 7938664 7940667 Bva05g01435 05 7938664 7940667 ECH