Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01434 ATGACAATGTTGCCTGTTTGCTCAGCCACCCCAAGCTATTCTCCTTGCCAGAATCTCTTATATGGAGGGTTTCAGCCCTTGTATCCATTCCGGAATGATCTCGATAGTAGATGTTTTGCAGAAGAAGGTTTACATCTGCGTTTGCAATATGGAAACCACGCTATGAGAAATTCCTTTGTAGCAGAGGCTACAAGTACGTGGAGTTCACCAACAATAATAGATGGACAACATTCACTGAGCAGTGGAGAATTCAGATACAACGAGTATTGTAATTTGTCTGCTGTATTGGAGGAATTGACGGACTTTACAGAACAGTCAGCTGAAGGATCAAATACATTAGTAGCACCAGGACAGCCAGAAGCAATATTAAGTACAGATATACTGTCAGAGAAGTTGAATCCCGAACCTAGTTCAATCAACTTGGACAGTGACTCATTAGCCAGCACAAAAGCAAGTATTGGTGATATTTTCAGTGGAATCAATGAGTCATTCAGTGCCTCCATCAATAAGGGAGAAAGTGCTCTTCAAAGTTCACTAGATACAACCACTTCTTTGATAAGATCTGTCATAGAAAATGCTACTAAGTCTGTTGATAATGCATTTGGTCAGGCGTTTTCTGCTGCTGATCAAACAGGGGAATTAGCTAATAAGAAATTGACAAACTTTTCAAATGAGCTAAATGCAGCCACAAATAAAGCACCTGCTATTGCTATTGATCTGTTGCGACGTGCAATCATAGTAGTAGAGAGTTCTCTTTCAAGTGGTGTTTCTTATGTTGTCTACCTTTATGGGTTGACCAAGGAGGTTCTTCCTGTGGGGATCAGGGATGCAGTAAATGTGTATGAGGAGAAAGCAACAGAAATCTTGAGGCCTATTGGATCTACATCTCAAGAGATCTACATGTCTGTCTATTCTTTGGAAAAAAGTCTTGGCTTGGATCCAAATGATCCAATCGTTCCATTTGTTGTTGTTCTTGGATCTTCGGCCACATTATGGGTCATTTATTGGTTGTGGACATATGGAGGTTACTCAGGTGATTTATCTCCCAAATCAGCTTTAGATCTGTtgacagaaaatgaaaatgctgcACTTATAGATGTTCGGAATGAGGATCTGAGAGAAAAAGATGGTATTCCAGATCTGAGACAGGCTGCTCGGTTTCGGTATGCAAGTGTAACTCCACTAGAGgtTGATGGTTCTGTAAGGAAGTTGTTGAAGAGTAATAGAGATCTTGATGACTCCTTGGTTGCTGTTACAATCCGGAATTTGAAGATTGTTAAGGACAGTTCCAAGGTTATAGTCTTGGATGCTGATGGCGCTCGTTCTAAAGGCATTGCAAGATCCTTAAAGAAAATTGGGATTAAGAATCCATACTTGGTTCGTGGTGGCTTTCAGTCTTGGGTGAAACAAGGTCTCCGCACCAAGGAACTTACGCCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAAGAAATTAATCCTTCTCCTTTGAAAGTTTTAGGTTATGGCACGGTTCTTATTGCTGGGTTGTATGGATTAGTAGAGTGGGAGAAGACATTACAGTTTATCGGTGTTTTGGGCCTCAGTCTGACTATTCTTGGGCGGGTGACTTCGTATGAAAACTCAAAAGATTTGCAGCAAGATGTGAGgTTGTTACTTGCTCCTATTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAGTTGGAATCAAACGGCATCGGGCTGCCTACATCACCTTCGTCGTCAGATGTCCAGAACCGCGTGTTGCAAGCTGCTGCCAAGCATGAATCTCAACCATCTGATACAGAAACTTTCCCAGATTCAGTTCCTGAACCAAACATTCCTCTCAATGAGAATATATG 1883 0.4116 MTMLPVCSATPSYSPCQNLLYGGFQPLYPFRNDLDSRCFAEEGLHLRLQYGNHAMRNSFVAEATSTWSSPTIIDGQHSLSSGEFRYNEYCNLSAVLEELTDFTEQSAEGSNTLVAPGQPEAILSTDILSEKLNPEPSSINLDSDSLASTKASIGDIFSGINESFSASINKGESALQSSLDTTTSLIRSVIENATKSVDNAFGQAFSAADQTGELANKKLTNFSNELNAATNKAPAIAIDLLRRAIIVVESSLSSGVSYVVYLYGLTKEVLPVGIRDAVNVYEEKATEILRPIGSTSQEIYMSVYSLEKSLGLDPNDPIVPFVVVLGSSATLWVIYWLWTYGGYSGDLSPKSALDLLTENENAALIDVRNEDLREKDGIPDLRQAARFRYASVTPLEVDGSVRKLLKSNRDLDDSLVAVTIRNLKIVKDSSKVIVLDADGARSKGIARSLKKIGIKNPYLVRGGFQSWVKQGLRTKELTPETALSILNEEAEAILEEINPSPLKVLGYGTVLIAGLYGLVEWEKTLQFIGVLGLSLTILGRVTSYENSKDLQQDVRLLLAPIRLGAQAFSWAAGKLESNGIGLPTSPSSSDVQNRVLQAAAKHESQPSDTETFPDSVPEPNIPLNENI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01434 627 SMART rhod_4 348 473 IPR001763 -
Bva05g01434 627 Pfam Rhodanese-like domain 349 469 IPR001763 -
Bva05g01434 627 MobiDBLite consensus disorder prediction 597 614 - -
Bva05g01434 627 ProSiteProfiles Rhodanese domain profile. 358 476 IPR001763 -
Bva05g01434 627 CDD RHOD 353 468 - -
Bva05g01434 627 Gene3D - 343 483 IPR036873 -
Bva05g01434 627 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 331 475 IPR036873 -
Bva05g01434 627 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 626 IPR044690 GO:0009704|GO:0071277|GO:0090333
Bva05g01434 627 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 626 - -
Bva05g01434 627 MobiDBLite consensus disorder prediction 597 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01434 Bva-Chr5 7919985 7928378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01434 284 437 Sulfurtransferasese or Rhodanese AT5G23060 28.395 9.69e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01434 - - gmx:100786123 890.952