Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01431 atgtcattttgcaACAAACTTGGGAATATCTTGAGGCAGAATGCTGCTCAGAACAAACTAGTGCCCGCATCTATGCTTAATTATCTTCGTTGCATGTCATCAAGCAATCTTTTCATTGGAGGTCTCTCATATGGAGTTGACGACCAGTCTCTTAGGGATGCATTTGCCAGCTTTGGAGATGTGGTTGAGGCAAGAGTTATCACTGATAGAGACACGGGAAGGTCTAGGggatttgggttcgtcaacttcTCCAGTAAAGAATCAGCAAGTTCAGCACTTTCTGCAATGGATGGACAGGAGCTAAATGGGCGAAGCATTCGAGTGAACTATGCTAATGATAGGCCTTCTGGACCCCGAACTGGCGGCGGCTATGGTGGTGGTGGCTATAGTGGCGGCAGCTATGGTGGTGGTGgttatta 419 0.4344 MSFCNKLGNILRQNAAQNKLVPASMLNYLRCMSSSNLFIGGLSYGVDDQSLRDAFASFGDVVEARVITDRDTGRSRGFGFVNFSSKESASSALSAMDGQELNGRSIRVNYANDRPSGPRTGGGYGGGGYSGGSYGGGGY 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01431 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 107 IPR000504 GO:0003723
Bva05g01431 139 Gene3D - 14 139 IPR012677 -
Bva05g01431 139 SUPERFAMILY RNA-binding domain, RBD 32 138 IPR035979 GO:0003676
Bva05g01431 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Bva05g01431 139 SMART rrm1_1 36 109 IPR000504 GO:0003723
Bva05g01431 139 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 139 - -
Bva05g01431 139 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01431 Bva-Chr5 7876474 7878995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01431 35 123 Eukaryotic Initiation Factors Gene Family AT4G34110 40.449 2.05e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01431 - - gmx:100499841 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01431 05 7876474 7878995 Bva05g01431 05 7876474 7878995 ECH