Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01426 ATGGCAAGAGTAAGGGATAGAACAGAAGATTTCAAAGATGCCATAAAGCATGGTGCTCACTCTTTGGGATATGATGAGGCCAAATTGGCATCTATTCTGGCATCTTTCATTATTCATAAACCTCGGCAAAGGTTACCTTTTACCAAAGCTGCAATTAAGACGcTTGACAGCATTGGAGAATTGGAACAGTTTTTGTTGAAGCATAGAAAGGACTATACAGATCTGCACCGCTCAACTGAACAGGAAAGAGACAGCATTGAACATGAAGTCAGtgcttttattaaaacttgCCAAGAACAAATTGATGTTCTCAAAAATAGTATTAATGACGAAGACGCAAACTCAAAAGGTTGGCTTGTTATTAAAGGCGCCAATTCTAATGCAGACACTATTGCCCACAAACATGGGGTGGTTCTAATTCTAAGTGAGAGACTCCATTCAGTTACTGCACAGTTTGATCAGCTCAGAGCTATACGCTTCCAGGACGCTATTAATAGAGCAATACCACGAAGACAACTTAACCGTGTGACTCGAACAGGTTCTGCAGAAAACTCTAGATTGGGGGATGTGGAGCCCAAAGAACCTGACGAGTTACGCAATGAACCTCTAAGAGTCCAACAACAACTCTTGGATGATGAAACACGCGCCCTTCAAGTGGAATTGAGTAATCTTCTAGATGCTGTTCAAGAAACTGAGACTAAGATGGTGGAAATGTCTGCATTGAATCACCTTATGTCCTCGCATGTTTTGCAACAATCTCAGCAAATTGAGCGTCTGTATGAGCAGGCTGTTGAAGCGACTAAAAATGTTGACCTTGGCAACAAAGAACTCTCCAAGGCCATTCAGCGGAACAGTAGTAGCAGGacttttcttttactctttctttttgcactTACTTTTTCAATCATCTTTCTTGATTGGTACAGTTA 929 0.3961 MARVRDRTEDFKDAIKHGAHSLGYDEAKLASILASFIIHKPRQRLPFTKAAIKTLDSIGELEQFLLKHRKDYTDLHRSTEQERDSIEHEVSAFIKTCQEQIDVLKNSINDEDANSKGWLVIKGANSNADTIAHKHGVVLILSERLHSVTAQFDQLRAIRFQDAINRAIPRRQLNRVTRTGSAENSRLGDVEPKEPDELRNEPLRVQQQLLDDETRALQVELSNLLDAVQETETKMVEMSALNHLMSSHVLQQSQQIERLYEQAVEATKNVDLGNKELSKAIQRNSSSRTFLLLFLFALTFSIIFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01426 309 PANTHER SYNTAXIN-18 5 309 - -
Bva05g01426 309 PANTHER SYNTAXIN-18 5 309 - -
Bva05g01426 309 Coils Coil 249 269 - -
Bva05g01426 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Bva05g01426 309 Gene3D - 211 306 - -
Bva05g01426 309 Coils Coil 94 114 - -
Bva05g01426 309 MobiDBLite consensus disorder prediction 175 197 - -
Bva05g01426 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01426 Bva-Chr5 7816129 7821153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01426 65 309 SNARE and Associated Proteins AT1G51740 73.577 2.97e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01426 K08492 - gmx:100778011 495.738