Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01393 aTGGGTAAGCTGAAGAAAACCCTAGTATCTCTCTCTATATTCCTGTTCTCTGTCTTGTTCTCCACCGCCATTGCCGATGACGGCACCTTCATGTCGGAGCTCCTGAAAGCCCTGTCTCCAACTCCTTCCGGTTGGTCTTCCGCTACcccattctgccaatgggatGGCGTCAAATGTGACAGCTCAAGCCGGGTCACCTCCATCAACCTCGCTTCCATGAAACTCTCCGGTACTCTTCCTTCAGAACTCAACTCGCTCTCTCAGCTCACTAGACTTTCTCTTCAGAGCAATGCTCTTTCTGGGCCGTTGCCCTCTTTGGCGAACCTTTCTCTACTTCAGGCGGTTTACCTTGGCTACAACAACTTTACTTCCATCCCTGATGGTTGCTTTGAAGGACTCACTAGCTTGCAGAACCTCAGCTTGAGTAATAATCTCGATCTAGCAGCGTGGACGATCCCAACCGGGTTGACTCAGTCCTCGTCTTTGAGAATTCTTGAACTGGGTTCTGTGAATATCACGGGTACCATACCGGATTTCTTTGGTTCGTTCCCGAGCTTGCAGGAAGTTCGTCTTTCTTACAACAATCTCACTGGGGGTTTGCCTAAGTCCTTCGGAGGATCGGAGATTGCGAATTTGTGGCTCAACAATCAGAATATTGGGTTAACGGGTACAATTGAAGTGTTGGGTTCAATGCCTCAGTTGTCTCAGGTGTGGCTTCACTCAAACAAGTTCACGGGTCCGATTCCTGATTTGTCAAATTGCACAAATTTGTTTGATCTGCAGCTTCGGGATAATGCTTTGACTGGTATAGTTCCTTCTTCTTTGATGGGTATGTCAAGCTTAAAGAACGTTTCTTTGGACAACAATAAGCTGCAGGGGCCTTTTCCAGAGTTTGGTAAAGGTGTTCTGATTACTCTGGAGGGGGTTAATAGCTTTTGCAAAATGACTGTAGGACCTTGTGATGACCGGGTGACCACTTTGCTTCAAATTGCTGAAGCATTTGGGTATCCAAGTAACTTGGCGGATTCATGGCAAGGGAATGATCCTTGTCAACCATGGACTTGCATTGTGTGCACAGGGAACAAGATTACTACTGTGAATTTCGAAAGGCAGAATCTGCAGGGAACAATCTCTCCTGCATTCGCCAATCTAACAGATTTGAGGAACTTGTATCTGAAAGATAATAATTTGACGGGTTCAATACCAGAGAGACTGACAACTATGGCTTCACTTGTGAATCTTGATGTGTCTAATAACAATCTTTCTGGGGAGATTCCTAAATTCCCATCAAGTGTTAACCTAAAATATACGGGTAACCTTTTGCTTGGAAAAAGTCCCAGTTCAGGAGGTGGAGGAAATGGAGGTAGTCCATCTGGGGGTTCTGGTGTTACACCAAGTGGAGGTGCATCTGGAAACGGTTCTTCACTATCACCTGGTTGGATTGCTGGTATTGTTATTATTGCTGTATTTTTTGTGGCAGTGGTTTTATTCGTCTTCTTGAAGTGTTATGCTAAAAATCGTCATCGGAAATTTGGAAGGGTTAGTAATCCTGAAAATGGAAAGGGTGACGTTAAACTTGATGTAATTAGTGTTTCCAATTCCAATGGATATGCTGGAGTTCCAAGTGAGTTACAAAGCCAAAGCAGTACTGGTGATCGTAGTGAACTTAATGTTTTTGAGGGTGGAAATGCTACAATTTCAATTCAAGTACTTAGACAGGTTACGGATAATTTCAGTGAAGAAAACATTTTAGGCAGGGGAGGATTTGGAGTTGTTTATAAAGGGGAGTTGCATGATGGAACACAAATTGCTGTCAAGAGGATGGAATCTGTTGCAATGAGAAGCAAAGGAATGAATGAGTTCCAAGCAGAAATTGCAGTCCTTAGTAAAGTTCGGCATAGGCATTTGGTTGCTCTTTTAGGATATTGCATTAATGGCAATGAAAGACTTTTGGTTTATGAGTACATGCCTCAAGGGACATTAACACAACATCTGTTTGATTGGCGTGAGAATGGGTGCGCTCCTTTGACTTGGAAACAAAGGGTTGTAATAGCTCTGGATGTAGGCCGGGGAGTGGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCACAGAGACTTGAAACCGTCAAACATACTTCTAGGTGATGACATGAGAGCAAAGGTTGCagattttggtttggttaagaaTGCACCTGATGGGAAGTATTCTGTTGAGACACGGTTAGCTGGAACATTCGGATATCTTGCCCCTGAATATGCAGCTACTGGAAGAGTGACAACTAAAGTGGATGTTTATGCATTTGGAGTAGTTCTGATGGAACTTATTACTGGTAGAAGGGCATTAGATGACTCAATGCCAGATGAAAGGTCCCATTTAGTTTCATGGTTCCGTAGAGTACTAATCAACAAGGAAAACATCCCAAAGGCAATTGACCAAACTCTGAACCCTGATGAAGAAACCATGGAGAGCATATATAAAGTCGCCGAGCTAGCCGGCCATTGCACGGCTCGCGAGCCGTACCAAAGGCCGGACATGGGCCACGCCGTCAATGTCTTGGTTCCTCTTGTAGAACAATGGAAACCTACAAgccatgaagaagaagaaagttatGGCATCAATCTAAACATGAGCCTTCCTCAAGCTTTGCGAAGATGGCAAGCCAATGAAGGCACCTCTGCTATCTTTAACGACATGTCGTTCTCACAAACCCAATCAAGCATCCCTTCTAAGCCTTCAGGATTTGCAGACACTTTTGATTCAATGGATTGCAGGta 2780 0.4327 MGKLKKTLVSLSIFLFSVLFSTAIADDGTFMSELLKALSPTPSGWSSATPFCQWDGVKCDSSSRVTSINLASMKLSGTLPSELNSLSQLTRLSLQSNALSGPLPSLANLSLLQAVYLGYNNFTSIPDGCFEGLTSLQNLSLSNNLDLAAWTIPTGLTQSSSLRILELGSVNITGTIPDFFGSFPSLQEVRLSYNNLTGGLPKSFGGSEIANLWLNNQNIGLTGTIEVLGSMPQLSQVWLHSNKFTGPIPDLSNCTNLFDLQLRDNALTGIVPSSLMGMSSLKNVSLDNNKLQGPFPEFGKGVLITLEGVNSFCKMTVGPCDDRVTTLLQIAEAFGYPSNLADSWQGNDPCQPWTCIVCTGNKITTVNFERQNLQGTISPAFANLTDLRNLYLKDNNLTGSIPERLTTMASLVNLDVSNNNLSGEIPKFPSSVNLKYTGNLLLGKSPSSGGGGNGGSPSGGSGVTPSGGASGNGSSLSPGWIAGIVIIAVFFVAVVLFVFLKCYAKNRHRKFGRVSNPENGKGDVKLDVISVSNSNGYAGVPSELQSQSSTGDRSELNVFEGGNATISIQVLRQVTDNFSEENILGRGGFGVVYKGELHDGTQIAVKRMESVAMRSKGMNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFDWRENGCAPLTWKQRVVIALDVGRGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDSMPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEESYGINLNMSLPQALRRWQANEGTSAIFNDMSFSQTQSSIPSKPSGFADTFDSMDCR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01393 926 SUPERFAMILY Protein kinase-like (PK-like) 556 854 IPR011009 -
Bva05g01393 926 CDD STKc_IRAK 584 857 - -
Bva05g01393 926 MobiDBLite consensus disorder prediction 446 469 - -
Bva05g01393 926 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01393 926 Pfam Leucine rich repeat 88 144 IPR001611 GO:0005515
Bva05g01393 926 PANTHER OSJNBA0070M12.3 PROTEIN 12 926 - -
Bva05g01393 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Bva05g01393 926 Pfam Protein tyrosine and serine/threonine kinase 581 852 IPR001245 GO:0004672|GO:0006468
Bva05g01393 926 Gene3D Transferase(Phosphotransferase) domain 1 656 879 - -
Bva05g01393 926 SUPERFAMILY L domain-like 26 435 - -
Bva05g01393 926 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01393 926 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 12 926 - -
Bva05g01393 926 SMART LRR_typ_2 183 206 IPR003591 -
Bva05g01393 926 SMART LRR_typ_2 384 408 IPR003591 -
Bva05g01393 926 SMART LRR_typ_2 109 132 IPR003591 -
Bva05g01393 926 SMART LRR_typ_2 133 159 IPR003591 -
Bva05g01393 926 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Bva05g01393 926 Gene3D Ribonuclease Inhibitor 29 316 IPR032675 -
Bva05g01393 926 MobiDBLite consensus disorder prediction 904 926 - -
Bva05g01393 926 Gene3D Ribonuclease Inhibitor 321 445 IPR032675 -
Bva05g01393 926 Pfam Leucine rich repeat N-terminal domain 322 358 IPR013210 -
Bva05g01393 926 Pfam Leucine rich repeat N-terminal domain 31 60 IPR013210 -
Bva05g01393 926 Gene3D Phosphorylase Kinase; domain 1 539 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01393 Bva-Chr5 7509722 7513624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01393 65 854 Receptor kinase-like Gene Family AT5G07280 33.171 1.79e-93 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva05g01393 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01393 - - gmx:100781851 1351.27