Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01383 ATGAACGACCAAACGAATGGAGCTGTGGTTCAACTGAAACTTATTGGCAAGCTGCAAGATGGGACTGTTTTCGTTAAGAAGGGTCATGACGATGAGCAAccatttgaattcaaaatttatgaagTAATTGATGGACTTGATAGAGCTGTGAAGAATAtgaagaagaatgaaattgCACTGGTGACCATTGGGCCTGAATATGCTTTCGGATCATCTGCTTCACCCCAAGAGTTGGCTACTGTGCCTCCCAACTCAACAGTATATTATGAGGTTGAGTTGGTATCCTTCATTAAGGAAAAGGAAACATGGGAGTTGAACACACAAAAGAAGATTGAGGCAGctgggaagaagaaggaagaaggcAACGCATTGTTCAAGGCTGGTAAATATGAAAGAGCATCAAAGAGATATGAGAAGGCTATAAGGTTTATTGAGTATGACTCCTCTTTCGGcgatgaagagaaaaaacaaagcaaattgTTGAAGATCACTTGCAATCTCAATAATGCTGCATGTAAATTGAAACTCAGAGACTACAAGCAGGCAGAAAAGTTGTGTACAAACGTGTTAGAACTTGATAGTATGAATGTAAAAGCTCTGTATAGAAGAGCACACGCTTATATTCAGCTTGTGGACTTGGATTTGGCTGAGATGGATAACAAGAAAGCCCTTGAAACAGACCCAGAAAACAGGGATGTGAAAATGgagtacaaaattttgaagaacaaAATGAGAGAATACAACAAGAAGGATGCACAGTTCTA 764 0.3442 MNDQTNGAVVQLKLIGKLQDGTVFVKKGHDDEQPFEFKIYEVIDGLDRAVKNMKKNEIALVTIGPEYAFGSSASPQELATVPPNSTVYYEVELVSFIKEKETWELNTQKKIEAAGKKKEEGNALFKAGKYERASKRYEKAIRFIEYDSSFGDEEKKQSKLLKITCNLNNAACKLKLRDYKQAEKLCTNVLELDSMNVKALYRRAHAYIQLVDLDLAEMDNKKALETDPENRDVKMEYKILKNKMREYNKKDAQF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01383 254 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 5 94 IPR001179 GO:0003755
Bva05g01383 254 Gene3D - 2 99 IPR046357 GO:0003755
Bva05g01383 254 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Bva05g01383 254 PANTHER PEPTIDYLPROLYL ISOMERASE 7 96 - -
Bva05g01383 254 PANTHER PEPTIDYLPROLYL ISOMERASE 97 254 - -
Bva05g01383 254 Coils Coil 230 250 - -
Bva05g01383 254 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 7 97 IPR001179 GO:0003755
Bva05g01383 254 SUPERFAMILY FKBP-like 5 114 - -
Bva05g01383 254 Pfam Tetratricopeptide repeat 198 230 IPR019734 GO:0005515
Bva05g01383 254 Gene3D Tetratricopeptide repeat domain 100 254 IPR011990 GO:0005515
Bva05g01383 254 SUPERFAMILY TPR-like 103 251 IPR011990 GO:0005515
Bva05g01383 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7 96 - -
Bva05g01383 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 97 254 - -
Bva05g01383 254 SMART tpr_5 197 230 IPR019734 GO:0005515
Bva05g01383 254 SMART tpr_5 163 196 IPR019734 GO:0005515
Bva05g01383 254 SMART tpr_5 114 147 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01383 Bva-Chr5 7414153 7415624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01383 6 96 Calmodulin-binding Proteins AT5G48570 41.935 2.27e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01383 K09571 - gmx:100810243 410.994