Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01377 ATGTTTGCAAGTGTTCCAAAAGGTGATGCCATTATTTTGAAGGCTGTATGCCACAATTGGGAAGATGAAAAGTGTgttcaatttttaagaaattgctACCAAGCTTTGCCACAAAATGGAAAGGTGATTGTTGTGGAGTTCGTCCTGCCAGAAACTCCAGAGGCAACTGATGCATCTAAGTTGGTTTCCAATCTCGacaatttaatgtttattacAGTTGGAGGAAAAGAGAGGACTGAGAAAGAGTTCGAGAACTTGTGCAAGAGGTCTGGGTTTTCCAAATTTCAGGTTGCTTGCCATGCCTTTTCTGCTTTGGGAGTGATGgagttttataaata 338 0.3698 MFASVPKGDAIILKAVCHNWEDEKCVQFLRNCYQALPQNGKVIVVEFVLPETPEATDASKLVSNLDNLMFITVGGKERTEKEFENLCKRSGFSKFQVACHAFSALGVMEFYK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01377 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
Bva05g01377 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 109 IPR029063 -
Bva05g01377 112 Pfam O-methyltransferase domain 1 93 IPR001077 GO:0008171
Bva05g01377 112 PANTHER O-METHYLTRANSFERASE 1 112 IPR016461 GO:0008168
Bva05g01377 112 Gene3D Vaccinia Virus protein VP39 2 100 IPR029063 -
Bva05g01377 112 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01377 Bva-Chr5 7371499 7372449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01377 1 112 Monolignol Biosynthesis Gene Families AT5G54160 53.982 9.41e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01377 - - gmx:100787536 189.119