Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01375 ATGGCTCCCAATAATTCTACAGAGAATGGAGTGGGGAAAGCATGCACTCAACTTTCAGAGGATAATGCTTGCCTCTCTGCCATGCTTCTTTCTACCACTCAGGTCTATCCTGCAGTGCTTAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCTAAGGCAACCCCACAGGGTTCACCCTTGTCTGTCTCCGAAATCGCTTCCAAGCTTCCAAACCAATACCCAGACTTGGCTCTTAGGCTTGAACGTATGCTGCGTTTGCTTGCCAGTTACACTCTTCTTGATTGTTCTACGCGCACCAATGAAGATGGTAGCACTGAAAGAGTTTATGGACTCTCAGAAAGTTGTATGTACTTGGTACCTGATGATAATAAAGGCAACCTTGCTTCTTTCACAACATTTCTGTCACACAGAGCATTAATGGAAATTTGGTG 437 0.4439 MAPNNSTENGVGKACTQLSEDNACLSAMLLSTTQVYPAVLNAAIELNLFEIIAKATPQGSPLSVSEIASKLPNQYPDLALRLERMLRLLASYTLLDCSTRTNEDGSTERVYGLSESCMYLVPDDNKGNLASFTTFLSHRALMEIW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01375 145 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 145 - -
Bva05g01375 145 PANTHER O-METHYLTRANSFERASE 13 145 IPR016461 GO:0008168
Bva05g01375 145 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 145 IPR016461 GO:0008168
Bva05g01375 145 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Bva05g01375 145 SUPERFAMILY "Winged helix" DNA-binding domain 20 124 IPR036390 -
Bva05g01375 145 Gene3D - 5 120 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01375 Bva-Chr5 7362468 7362905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01375 16 145 Monolignol Biosynthesis Gene Families AT5G54160 42.308 6.71e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01375 K13066 - gmx:100802593 165.236