Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01359 atgttgaaatccATTGTGAAAAGCTTCAATGTTCAATCGAATTGTCTCCAGCACAAGAATCAAGTCGCAAACCATGAGTCGTTGCATGGTGCAAACTCAGTTCCCCAGACATTGCAGTTGGTAAACCGCGATGATTCGATAGAGATAGAGGAAGGGATGCAATGTAAGTGCTATCATGACATTGAGGATGTCAAGAGTGTTGAAGAAGGTGTCAATGTTGAAGCTGGGCATGATGCTAATGCTAATGCTAACAGCACTTTCCTTCATGCTGTCATCAATATGGTTGGCATGCTCATTGGTTTGGGGCAATTGTCAACTCCATATGCTGTACAAAATGGTGGCTGGGCATCTTCCTTTTTGCTTATTGGACTAGGTGTGATGTGTGCCTATAGTTCCCATTTACTTGGGAAATGCCTTGAAAGGAACCCAAACTTGAGAAGTTATGTTGACATTGGCCACCAAGCATTTGGCAAAAAAGGAAGTATCTTAGCAGCAACTTTCATCTACATGGAGATCTTCATGGCCCTTGTTTCCTACACAATCTCACTACATGACAACTTGATCTCAGTCTTCTTGGAGACTCATCTGAATCTTCATTGGGCAAAATTGTCCACATCCCAGATCCTCACCACAGTTGCTATGCTAATAGCTGTGCCTAGTTTGTGGTTGAGAGATCTTTCTTccatatcttttctttctacttGTGCTAATCACAAGATACCAGTCCTCCAGTTGCATAATATTCCTTCAATCTCTGGCCTTTACGTCTTCAGCCTTGCAGGACATATTGTTTTCCCTGACTTATATAAAGCCATGAAAGATCCATCAAAGTTCACCAAGgTTTCTATTGTGAGCTTTACATTAGTTACAATACTTTACACAACGCTAGGCTTCATGGGTGCCAAGATGTTTGGTTCTGAAGTCAACCCTCAAATCACTCTGAGTTTACCACCAAAGTCAATTGTATCAAAGATTGCTCTGTGGGCAACTGTGCTGACACCCATGACCAAATATGCTCTTGAATTTGCACCATTTGCCATTCAGCTAGAGCACAAGCTTCCAAGTTCCATGAGTGTCAGAACCAAAATGATAATCAGAGGCTCTGTGGGTTCATTTCTGCTTTTGGTTATTCTTGTTCTTGCTCTATCGGTGCCTTATTTTCAATATGTGCTTAGTCTCACAGGGTCACTTGTAAGCATTGCAATCTGTTTGATTCTCCCTTGTGGGTTTTACACCAAGATTTTTTGGGGTCATATGCCAAAAACCCTATTGGTTTTGAACCTTTCTCTCATTGGTTTAGGGTTATTTTTTGGGGTTATTGGGACCATTTCCTCATCTAAGTTATTagtgaaaaattttcatgggGCTAGCTG 1373 0.3999 MLKSIVKSFNVQSNCLQHKNQVANHESLHGANSVPQTLQLVNRDDSIEIEEGMQCKCYHDIEDVKSVEEGVNVEAGHDANANANSTFLHAVINMVGMLIGLGQLSTPYAVQNGGWASSFLLIGLGVMCAYSSHLLGKCLERNPNLRSYVDIGHQAFGKKGSILAATFIYMEIFMALVSYTISLHDNLISVFLETHLNLHWAKLSTSQILTTVAMLIAVPSLWLRDLSSISFLSTCANHKIPVLQLHNIPSISGLYVFSLAGHIVFPDLYKAMKDPSKFTKVSIVSFTLVTILYTTLGFMGAKMFGSEVNPQITLSLPPKSIVSKIALWATVLTPMTKYALEFAPFAIQLEHKLPSSMSVRTKMIIRGSVGSFLLLVILVLALSVPYFQYVLSLTGSLVSIAICLILPCGFYTKIFWGHMPKTLLVLNLSLIGLGLFFGVIGTISSSKLLVKNFHGAS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01359 457 PANTHER AMINO ACID TRANSPORTER AVT1H 238 454 - -
Bva05g01359 457 Pfam Transmembrane amino acid transporter protein 84 237 IPR013057 -
Bva05g01359 457 Pfam Transmembrane amino acid transporter protein 243 443 IPR013057 -
Bva05g01359 457 PANTHER OS05G0424000 PROTEIN-RELATED 238 454 - -
Bva05g01359 457 PANTHER OS05G0424000 PROTEIN-RELATED 21 234 - -
Bva05g01359 457 PANTHER AMINO ACID TRANSPORTER AVT1H 21 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01359 Bva-Chr5 7207794 7210265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01359 49 456 Amino Acid or Auxin Permease AAAP Family AT5G16740 58.028 2.11e-156 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01359 - - gmx:100787423 588.571