Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01356 atgaagaactatttgggttttgggtttgggtTTCTCCAATCACTCCTATGTTTTctggtttcattttcttgtttgctgCTGACATGTTTGGGAGACAACATTGGTGTAAATGTTCAGCTGAACGACGATGTTCTTGGCCTGATTGTGTTCAAATCAGACCTCCATGACCCTTCTTCTTATCTCGCTTCATGGAGCGAAGACGACATGAATCCATGTTCTTGGCAATTCATACAATGCAATCCAGTGAATGGAAGAGTCTCAGAAGTTTCATTGAATGGCTTAGGCTTATCTGGGAAAATTGGAAGAGGGCTTGAGAAGTTAACACATCTCAAGGTACTGTCTCTTTCTCATAACAACTTAACTGGGACTATTAGTCCACAGCTTGCTCTTTCCACTTCTCTTGAGAGACTAAACCTTAGTCACAACAGTTTCTCTGGCCCTATTCCCACTTCTCTAGTCAACATGAGTTCAATGAGATTCCTTGATCTTTCAGAGAATTCTTTCTCAGGAACAGTCCCtgacaatttttttgaaaactgtGCTTCACTTCATTACCTTTCTCTAGCTAGAAACATGTTTGAAGGGCCAATTCCTAGTTCAATCTCTAGATGCTTCTCATTGAATAGCCTTAATCTTTCCGATAACCGGTTCGCGGGTAATGTAGATTTCAATGGGATTTGGTCATTGGGAAGGCTTAGGAGTTTGGATCTGTCCAACAATGCCTTATCTGGATATTTGCCTAATGGAATATCAGCCATACATAACTTGAAAGAGATGTTATTAGAGAATAATCACTTCTCAGGACCATTACCCTCTGATATTGGACTCTGCCTGCATTTAAATAGGTTGGATTTTGGTTATAATCAGTTTACTGAAGCATTGCCAGAATCACTTTCAAGGCTTAATTCTTTGACATATTTGAGggcttcaaataatttgttttccaGTGAGTTTCCCCAGTGGATTGCTAACATGACAAGCTTGGAATACCTTGAACTCTCAAACAATCAGTTCTTTGGAAGCATCCCATTTTCAATTGGGAAACTTAGATCACTGAGTTATCTCAGTCTTTCAAATAACAAACTTGTGGGGAGCATTCCAATGTCACTGGTTTCGTGTACTAAGTTATCGGTGATTCGGCTTAGGGGAAATGGTTTCACTGGTAGCATACCAGAGGGATTATTTGGCCTAGGATTGGAGGAAATAGACTTGTCACATAATGAGCTAACAGGTCCAATACCAGCAGCCTCAAGCAGAATCTTTGAAACTCTTTCAAGATTGGATCTTTCCGAAAATCATCTCAAGGGGAATATCCCTGCAGAAATGGGTCTTgtttcaaaactaaaatacttGAATCTGTCATGGAATGATCTTCAATCTCCAATGCCTCCAGAACTGGGTCTCCTTCAGAATCTAGAAGTGTTAGACCTTCGAAACAGCGCGTTGCACGGTTCAATCCCAGATGAAATATGTGATTCAGGAAGTTTGGCCATTCTTCAACTTGATGGAAATTTCTTGACAGGTTCTATTCCACAAGAGATTGGGAATTGCACATCTCTATACTTGCTGAGCTTGTGCCACAATAATTTGACTGGTACAGTTCCCAAATCCCTGTCAAAGTTAAACAAGCTCAAAATCCTCAAATTGGAGTTCAATGGACTAACTGGAGAATTACCACAAGAACTTGGGATgcttcaaaatcttcttgctgtgaatatatcatataacAGGCTCACAGGAAGGCTTCCCGCAGGTAGCATTTTCCCCAACTTGGACAAGAGTTCTTTGGAAGGAAACTTGGGTCTTTGCTCGCGCCTGCTGGAGGGTCCATGTAAGATGAATGTGCCAAAGCCACTAGTGCTGGATCCAAATGCCTATAAGAACCAAATGGGTCCTCATAGGCAAAGAAACGAAACTTCTATGCCGAGCTCGATTCATCGCCACAGATTCCTGAGTGTTTCTGCCATTGTAGCAATCTCAGCagcttttgttattattttgggAGTGATTGCTATTAGCCTACTCAATATTTCTGTAAGAAGAAGACTAGCCTTTGTGGATAATGCCTTGGAAAGCATGTGCTCAAGCTCTTCAAGGTCAGGATGTTTACCCACGGGGAAGCTGATTCTGTTTGATTCAAATTCCTCTGCTGAATGGATCAGCAATCCTGAATCCTTGCTCAACAAGGCATCTGAGATTGGAGAAGGCGTTTTCGGAACAGTTTACAAAGTTTCATTGGGATCACAAGATAGAGTGGTAGCTGTTAAAAAGCTTGTCAACTCAAACATGATCCAACATCCAGAAGATTTCGATAGGGAAGTTCGAATTTTAGGCAAAGCAAGGCACCAAAATTTGATTGCATTGAAAGGATACTACTGGACTCCTCAAACCCAGCTTTTAGTGACAGAATATGCACCAAATGGAAGCTTGCAATCCAAGCTACATGACAGACTTCCTTCAAGTCCACCTCTTTCTTGGGCTAATAGGTTCAAAATTTTGCTTGGAACCGCAAAGGGACTTGCCCATTTGCACCATTCATTTCGTCCACCAATCATTCACTATGACATAAAGCCAAGCAACATTCTACTGGATGAGAACTTCAACCCAAAGATCTGTGATTTTGGATTGGCACGTCTTCTAATAAAGCTTGACAGACATGTAATGAGTAACAGGTTCCAGAGTGCATTAGGGTATGTGGCACCAGAATTGGCATGCCAGAGCTTAAGGGTCAACGAGAAATGTGATATATACGGCTTCGGGGTGATGATCCTCGAGCTCGTGACCGGTAGGAGGCCGGTGGAGTATGGAGAAGACAATGTGCTGATACTGAATGATCATGTGAGGGTGTTGCTTGAACAAGGGAATGTGTTGGATTGTGTGGATCCAAGCATGGGTGAATACCCAGAGGATGAAATATTGCCAGTTCTCAAGCTAGCAATGGTGTGCACCTCTCAGATTCCTTCTAGCAGACCTACAATGTCAGAAGTGGTGCAAATTCTGCAGGTCATTAAAACTCCAGTTCCTTTAAGGATGGAAATGTTTTG 3044 0.3995 MKNYLGFGFGFLQSLLCFLVSFSCLLLTCLGDNIGVNVQLNDDVLGLIVFKSDLHDPSSYLASWSEDDMNPCSWQFIQCNPVNGRVSEVSLNGLGLSGKIGRGLEKLTHLKVLSLSHNNLTGTISPQLALSTSLERLNLSHNSFSGPIPTSLVNMSSMRFLDLSENSFSGTVPDNFFENCASLHYLSLARNMFEGPIPSSISRCFSLNSLNLSDNRFAGNVDFNGIWSLGRLRSLDLSNNALSGYLPNGISAIHNLKEMLLENNHFSGPLPSDIGLCLHLNRLDFGYNQFTEALPESLSRLNSLTYLRASNNLFSSEFPQWIANMTSLEYLELSNNQFFGSIPFSIGKLRSLSYLSLSNNKLVGSIPMSLVSCTKLSVIRLRGNGFTGSIPEGLFGLGLEEIDLSHNELTGPIPAASSRIFETLSRLDLSENHLKGNIPAEMGLVSKLKYLNLSWNDLQSPMPPELGLLQNLEVLDLRNSALHGSIPDEICDSGSLAILQLDGNFLTGSIPQEIGNCTSLYLLSLCHNNLTGTVPKSLSKLNKLKILKLEFNGLTGELPQELGMLQNLLAVNISYNRLTGRLPAGSIFPNLDKSSLEGNLGLCSRLLEGPCKMNVPKPLVLDPNAYKNQMGPHRQRNETSMPSSIHRHRFLSVSAIVAISAAFVIILGVIAISLLNISVRRRLAFVDNALESMCSSSSRSGCLPTGKLILFDSNSSAEWISNPESLLNKASEIGEGVFGTVYKVSLGSQDRVVAVKKLVNSNMIQHPEDFDREVRILGKARHQNLIALKGYYWTPQTQLLVTEYAPNGSLQSKLHDRLPSSPPLSWANRFKILLGTAKGLAHLHHSFRPPIIHYDIKPSNILLDENFNPKICDFGLARLLIKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLDCVDPSMGEYPEDEILPVLKLAMVCTSQIPSSRPTMSEVVQILQVIKTPVPLRMEMF 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01356 1014 SMART serkin_6 727 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01356 1014 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515
Bva05g01356 1014 ProSiteProfiles Protein kinase domain profile. 727 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01356 1014 SUPERFAMILY Protein kinase-like (PK-like) 727 1004 IPR011009 -
Bva05g01356 1014 Pfam Leucine Rich repeat 447 459 IPR001611 GO:0005515
Bva05g01356 1014 Pfam Leucine rich repeat 109 167 IPR001611 GO:0005515
Bva05g01356 1014 Gene3D Ribonuclease Inhibitor 204 321 IPR032675 -
Bva05g01356 1014 SMART LRR_typ_2 107 131 IPR003591 -
Bva05g01356 1014 SMART LRR_typ_2 541 565 IPR003591 -
Bva05g01356 1014 SMART LRR_typ_2 155 179 IPR003591 -
Bva05g01356 1014 SMART LRR_typ_2 229 252 IPR003591 -
Bva05g01356 1014 SMART LRR_typ_2 325 349 IPR003591 -
Bva05g01356 1014 SMART LRR_typ_2 469 493 IPR003591 -
Bva05g01356 1014 Gene3D Phosphorylase Kinase; domain 1 727 808 - -
Bva05g01356 1014 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Bva05g01356 1014 Gene3D Ribonuclease Inhibitor 325 614 IPR032675 -
Bva05g01356 1014 PRINTS Leucine-rich repeat signature 232 245 - -
Bva05g01356 1014 PRINTS Leucine-rich repeat signature 349 362 - -
Bva05g01356 1014 ProSitePatterns Protein kinases ATP-binding region signature. 733 757 IPR017441 GO:0005524
Bva05g01356 1014 CDD STKc_IRAK 733 1001 - -
Bva05g01356 1014 Gene3D Transferase(Phosphotransferase) domain 1 809 1008 - -
Bva05g01356 1014 SUPERFAMILY L domain-like 57 411 - -
Bva05g01356 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Bva05g01356 1014 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 1011 - -
Bva05g01356 1014 Pfam Protein kinase domain 729 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01356 1014 SUPERFAMILY L domain-like 399 604 - -
Bva05g01356 1014 Gene3D Ribonuclease Inhibitor 43 200 IPR032675 -
Bva05g01356 1014 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Bva05g01356 1014 PANTHER BNAA09G02190D PROTEIN 11 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01356 Bva-Chr5 7171700 7175242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01356 13 1011 Receptor kinase-like Gene Family AT3G28040 62.574 0.0 1220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bva05g01356 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01356 - - gmx:100813764 1600.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01356 05 7171700 7175242 Bva05g01356 05 7171700 7175242 ECH