Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01336 ATggGGGCTTACAAGTATGTATCAGAGCTTTGGCGTAAGAAGCAGTCGGATGTTTTGAGATTTTTGCAAAGGGTCAGGTGCTGGGAGTACCGTCAGCAGCCATCCATTGTCCGACTGACAAGGCCCACCCGCCCTGATAAGGCACGTCGCCTGGGTTACAAGGCAAAGCAGGGTTATGTGGTCTACCGTGTTCGTGTTAGGAGAGGTGGCAGGAAGAGGCCAGTTCCAAAAGGTATTGTGTATGGGAAGCCTACAAACCAAGGTGTTACCCAGCTGAAATTTCAACGCAGCAAAAGGTCAGTTGCCGAGGAACGTGCTGGTCGGAAGTTGGGTGGATTGAGGGTTCTCAATTCCTACTGGGTGAACGAGGACTCTACCTACAAGTACTATGAGATAATCTTGGTGGATGTTGCTCACAGTGCCATCCGCAATGACCCAAGAATCAATTGGCTCTGCAACGCTGTTCACAAGCACAGGGAACTCCGAGGGCTCACTTCTGCTGGCAAGAAAAATAGGGGCTTGGTTGGAAGGGGACATCTCTACCACAAAGCACGTCCTTCTCGCAGAGCAACCTGGAAGAGAAACAACACCATTTCCCTTCGTCGTTACCGTTA 614 0.5049 MGAYKYVSELWRKKQSDVLRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHSAIRNDPRINWLCNAVHKHRELRGLTSAGKKNRGLVGRGHLYHKARPSRRATWKRNNTISLRRYR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01336 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bva05g01336 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
Bva05g01336 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Bva05g01336 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva05g01336 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva05g01336 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva05g01336 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01336 Bva-Chr5 7036620 7038697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01336 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 91.176 4.70e-126 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01336 K02877 - thj:104806672 384.03