Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01314 ATGGCTTTATGTGTCCGTAGCTCCTGCTACTTCCGTTTCGCCGTTGCCGTCGTTGCTTTAATTGCCTTCGCCGGAATCTTAACTTGCGATGCACAAGCTGTCGCCAGTTCCTGCAACGGGATATACTTGTCCTATGCCTACACCCGCGGAACCAGCCTTCCTCCCAATGTCTCCGATCCGGCGAAGCAACCCTACCGATTTGAGTCGACGCTTACTGTACTCAACAACGGCCTTGATGAGCTCAAGTCATGGAAGGTTTTTGTTGGATTTCAGCACGACGAGCTTTTGGTCTCTGCTTCGAATGCGGTGCTTGCCGATGGTACTACCCTTCCTGCCAGTGTTGGAAATGGAACAACTTTTGCTGGCTACCCCATGAGCGATCTTAAGACGGCGGTTGAGACTGCTGGGGACTTGACCCAGATGCAGGTTCAGATCGATTTGGTGGGAACACTTTTTGGGGTGGCGCCACCCGCGGTGCCTTTGCCCAACAACATCACGCTGGCCAATGATGGTTTTATCTGTAAGAAGCCCGCTGGTCAAGGGAAGAATGAGACTAATGTCTGTTGTACAAAAGATACCAACTTCAAAACAAACATCACAGAAGATGAGGAATTCCTACCCCGCCAGAATGGTGACCTTACAATTATGTACGATGTGATCAGAACATATGATTCCAACTACTGGGCAGAGGTGACAATATCAAATCATAACCCCCTTGGCCGTCTTGATAACTGGAGATTAAGCTGGGACTGGATGAAGGATgagtttatttattcaatgaAGGGGGCTTATCCATCTGTTGTGGATTCTTCTGATTGTATCTTTGGGAAACAAGGTACATACTACAAGGAACTTGATTTTGCCAATGTATTGAATTGTGAAAGAAGGCCAACAATTATTGATCTCCCTCCCACAAAGTTCAATGACACTGATGTTGGGAAAATTCCTTTTTGCTGCCGGAATGGTACTATCTTGCCGCCATCGATGGACTCAAGTAGGTCCACTTCAAGGTTCCAAATACAGGTCTTCAAAATGCCTCCAGATCTTAATCGGTCCCAGCTTGAACCACCACAAAACTGGAAGATTAGCGGCACACTCAACCCTGACTACAAATGTGGCCCCCCAATTCGGGTGAGTCCTAGTGAATCCCCAGATACAACAGGCTTACCATTAAACAAAACTGCTATGGCCAGTTGGCAGATTGTGTGCAATATAACAACTGCTAAGGGGGAAACACGTAAATGCTGTGTCTCGTTTTCTGCATATTACAATGATTCTGTCATTCCTTGCAAAACATGTGCTTGTGGATGCTCCAGTAACACTGGGAGATCTTGTAGTACTACCGCACAAGCTATGTTTCTTCCACCAGAGGCACTTCTTGTTCCATTTGAGAATCGGAGTGCCAAAGCTATTGCTTGGGCTGGATTGAAACATCTCTCAGTGCCAAACCCAATGCCCTGTCCTGATAACTGCGGTGTGACCCTTAACTGGCATGTAGCTTCTGATTACAGCCGAGGATGGAGTGCAAGGATCACACTTTTCAATTGGGGTGATACTGATTTTGTGGATTGGTTTGCTGCAGTGCAAATGGATAAAGCAGCTCCAGGTTTTGAGAAAACGTACTCATTCAATGGTAGCACCTTAGATGGCGTAAACAATACAATATTCATGCAAGGTCTTGAAGGATTGAATTACCTTGTAGCAGAAACAAATGGAGCTAACCCTCTGAAAGATCCTAGGGTGCCTGGAAAACAACAGTCAATACTCTCATTCACAAAGAAAACTACTCCTGGAATCAATGTGGCTGGCGGAGATGGTTTTCCCACTAAAGTTTTCTTTAATGGGGAGGAATGTTCTCTTCCTTCAATAATTCCAAGTAGCGGTTTTAGAAAGGAATTTTCCTTAGCTACATCAATGTTCCTGACACTACTGCTGTTCATCTTGATGCGGCAATA 1955 0.4537 MALCVRSSCYFRFAVAVVALIAFAGILTCDAQAVASSCNGIYLSYAYTRGTSLPPNVSDPAKQPYRFESTLTVLNNGLDELKSWKVFVGFQHDELLVSASNAVLADGTTLPASVGNGTTFAGYPMSDLKTAVETAGDLTQMQVQIDLVGTLFGVAPPAVPLPNNITLANDGFICKKPAGQGKNETNVCCTKDTNFKTNITEDEEFLPRQNGDLTIMYDVIRTYDSNYWAEVTISNHNPLGRLDNWRLSWDWMKDEFIYSMKGAYPSVVDSSDCIFGKQGTYYKELDFANVLNCERRPTIIDLPPTKFNDTDVGKIPFCCRNGTILPPSMDSSRSTSRFQIQVFKMPPDLNRSQLEPPQNWKISGTLNPDYKCGPPIRVSPSESPDTTGLPLNKTAMASWQIVCNITTAKGETRKCCVSFSAYYNDSVIPCKTCACGCSSNTGRSCSTTAQAMFLPPEALLVPFENRSAKAIAWAGLKHLSVPNPMPCPDNCGVTLNWHVASDYSRGWSARITLFNWGDTDFVDWFAAVQMDKAAPGFEKTYSFNGSTLDGVNNTIFMQGLEGLNYLVAETNGANPLKDPRVPGKQQSILSFTKKTTPGINVAGGDGFPTKVFFNGEECSLPSIIPSSGFRKEFSLATSMFLTLLLFILMRQ 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01314 651 PANTHER COBRA-LIKE PROTEIN 7 1 650 - -
Bva05g01314 651 Pfam COBRA-like protein 227 406 IPR006918 GO:0010215|GO:0031225
Bva05g01314 651 PANTHER COBRA-LIKE PROTEIN 7 1 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01314 Bva-Chr5 6917363 6920571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01314 38 635 COBRA Gene Family AT4G16120 68.657 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01314 - - gmx:100803929 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01314 05 6917363 6920571 Bva06g00263 06 4255704 4258372 BWGD
Bva05g01314 05 6917363 6920571 Bva05g01314 05 6917363 6920571 ECH