Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01312 ATGGTGGATCAGACTGGAAAAAGATCACAAGCTGAGGACGCTGATAACAGGAATCCAAACGAGGCTTCATCAGAGGAGAGCCCAATGGCTGAGCAGAAAAAGACATGCGCTGATTGTGGCACAACCAAGACCCCTCTCTGGAGAGGTGGTCCTGCTGGCCCTAAGTCGCTGTGCAACGCTTGCGGGATCAGAagcaggaagaagaagagagctATCCTGGGTATCAACAAGGGAAGCGCAGAGGATAACAAGAAGGGAAAGAGAAGCAACAATGGCGGCGGAAACAATAAGCTTGGCTATAGTTTGAAGCAGAGACTAATGGCTTTGGGGAGAGAGGTTTTGATGCAGAGATCAAGCGTGGATAGACCGAGGAAAAGGCTAGGAGAGGAAGAACAAGCAGCAGTGCTATTGATGTGTCTGTCCTATGGCTCCGTTTATGCTTA 443 0.474 MVDQTGKRSQAEDADNRNPNEASSEESPMAEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGINKGSAEDNKKGKRSNNGGGNNKLGYSLKQRLMALGREVLMQRSSVDRPRKRLGEEEQAAVLLMCLSYGSVYA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01312 147 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
Bva05g01312 147 MobiDBLite consensus disorder prediction 1 20 - -
Bva05g01312 147 CDD ZnF_GATA 35 70 IPR000679 GO:0006355|GO:0043565
Bva05g01312 147 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Bva05g01312 147 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 32 70 - -
Bva05g01312 147 MobiDBLite consensus disorder prediction 72 99 - -
Bva05g01312 147 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Bva05g01312 147 SMART GATA_3 30 87 IPR000679 GO:0006355|GO:0043565
Bva05g01312 147 Gene3D - 31 94 IPR013088 GO:0006355|GO:0008270
Bva05g01312 147 MobiDBLite consensus disorder prediction 1 59 - -
Bva05g01312 147 PANTHER OS01G0976800 PROTEIN 2 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01312 Bva-Chr5 6906724 6907971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01312 1 147 C2C2-Gata Transcription Factor Family AT5G49300 58.503 6.96e-53 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva05g01312 GATA 6.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01312 - - zju:107433211 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01312 05 6906724 6907971 Bva05g01312 05 6906724 6907971 ECH
Bva05g01312 05 6906724 6907971 Bva13g03257 13 22610473 22612828 ECH