Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01309 ATGGGAGTAGAGAAAGAACGGTCAAAAAGTGGAGGAAGATATGTTGGTGGCTTTTTCCAGTTATTTGACTGGAGCTCAAAATCTcgtaagaaattatttgcaaaCAAGTCAGATTTACCAGAATCTTCGAAACAAGGGAGAGAAGTTAGTGGCAACTTAGCAATGACACGGCCCTATGTGgtagatgaagatgaaattgGAGTTGGGACAAGTGTTAGAGGAAGTAGTGATCATAGTTATGCTTCATCAGTTACAGATGACGAAGTATATGGAGCAAGGGTTCCCAGTGTAGTTGCCAGGCTTATGGGATTAGATTCGCTACCAACTTCTAGTTTTCTTGATCCTTATTCTACCCCTTATTTTGATACTCGATCCCTTCAAGAGTCCCAATATGGCaggaaaaatctaaattatcaGCATGACCATCAGAGTGTTTACTCTGGAAATTTGCTTGAAAAAGTTGAGAGCTCTTCTAGGAACTTCAAAGAGCCAAAGCCTCAAAAGACCCTTAGCAAACCTATAGAAAAGTTTCAGACAGAAGTATTGCCTCCAAAATCAGCGAAATCAATTCCAGTTACACAACATAAACTTTTGTCACCTATTAAGGGTCGAGGATTTGTTTCAAGCAACAATGCTGCTTATATAATGGAGGCTGCAGCGAGAATTATTGAACCTGGACCCCATGTTGTTGCTACAAAGGCTAAGACACCTATCATAGCTTCACCTACAGTATCATTGAAGGTTAGAGATCTTAAAGAGAAAGTGGAGGCTTCACAGAAGGCACCTCTAACTCGGTCATCTTCCATGACCTTTAGAGCTCGAGATCCAAAAGCAAATAGAGAGCTTTCCCAAAGAACAACCAGGCTTTCTGAATCCTCTCAAAAATCAGTTGAGGCAAATGCTGCCAAGTATCTCAAGGGACAATCTTTGAACAAAAGCTGGACTGGATCCGTGGAAACATCCATCAGGCCTCCTACTTATGCAGAAGAAGATTCTTCTTTTAAGAATAAAGGGAAATCTATTTCACTTGCAATCCAAGCAAAAGTGAATGTGCAAAGAAGGGAAGGTTTGAGTACAAATGGTGAAAGAAGTTTGGCTGGCCAGAAAGAACATCTTGAGGTTAAGCCTAACCAGCCATCCAAggcaaattttcaaatgaatttgCATAAGAAATCTTCAGGTCAGAATACTTCTGGTGTTCTCAGACAGAATAATCAGAAACAGAATTGTTCAGTTGATAAGGACAAATTACCATCAAAGTCTTTGGCCACCAATTCACATGGTAGAAAAGTTCTGTCTGGGGATTCCTCTTCTGGACGTCATAGAAGCTCTAGTAGTAAGTCTATTGGGAAATCTAAAGCTGGATCCAGGAAGCCTGGTTTGGAGGCGACAGATAGTGAGAAGGAGGTTTCGTACACCAGTACAAACAGTTATCCTAGAAAGAAGCGATCCACAGGGAGGGACTGGAATGATCGGGTTGTTGATAATTTATTCACTGACAAAACTCTGACGCACGTTCAGTCTAATGTAGTTAGTAACAACCACTTAAGTTGGGCTGaagaagttaaaaagaaagacatgGATGTTGTTTCCTTCACATTTACTACTCCTCTGACAAGAAACAATGCCGGTTTTGAGACGTCTGGACAAGCTGACCAGAAAACTAATGGTCTTTCCCTAGATCACCGCATCAAGAGAGTGTTGCTTGACGCAGACAGTACAAAGTCCCCGGTAGGATACAATGTGATAGGTGGTGATGCTTTAGGTATCCTTTTGGAGCAGAAGTTGAGGGAATTAACATTTGGAGTTGAGACTTCTTCTCAAGACTCTTCTAAAGTAAAGCTACCTTCCAGTATTGCATCAACTTCAAATGATTCATTACCCTCCCTTAATTCAGTTGACATCATGCCAAGATATCAACAGACGAAGGACCAAAATGTGCTATTTACAGATAAAATGGGCATCAGACATGATCATTCAGACAACACCTCCACCGATCTTCCTGAATTAACTTTGAAACACAAGTCGTGGATTGTTGATGATATGGAAGAGTGTACGAGCAATCATATAGAATCACAGTTATTCAATTGTCGACATCCAAGTCCAATCTCCGTTCTTGAACCTTCCTTTTCGACTGAAAGTTTTGAATCTTCAGTCAGCACGGATGCTACTAATAGTACAGAAGGAAGTAAGTTGTGCTTATCTGCTCAAGTTCAGGAAGTTCTTAGTTTGAATTGTTCAAGGAAGTTCTATCCTGCAGAAGCTGATACGGAGTTGTCAGATTCAGCTTCTTCAACATCAGCTGGGGCCATGGTAAAGAAGCACGCAAATGCATTTTCAATCATGAACTTTGGAAGGTTAAGTACATGGGAGTTGGACTATGTGAAAGTTATACTGTCTAATGTGGATTTAATGTTCATGGACTTTGCCCTGGGTCGAGCACGTGAGATTGTAAATCCTCATCTATTCAACCAGTTGGAAAGTCGGAAAGGAGGGTTTGAGAGTGATGGTGGTGAGCCTAAGCTAAGAAGGAGAGTTATATTTGATTGTGTCAGTGAATGTTTGGACTTAAGATGCAGGCGTTATGTTGGTGGGGGATACACAATGTGGACCAAAGGGATCACAATGTTGAGAAGAAAGCAATTCTTAGCAGAAGAAGTGTACAAAGAGATCTCAGGATGGGGAGGCATGGGAGATTCAATGGTAGATGAGCTTGTAGACAAGGACATGAGCAGCCAATATGGAAGATGGCTAGATTTTGATGTTGATGCTTATGAACTTGGTGCAGAAATCCAGAATCAGATACTAAATTCTTTGGTTGATGATGTTGTTGATGATATGTTGCAAATATA 2852 0.3976 MGVEKERSKSGGRYVGGFFQLFDWSSKSRKKLFANKSDLPESSKQGREVSGNLAMTRPYVVDEDEIGVGTSVRGSSDHSYASSVTDDEVYGARVPSVVARLMGLDSLPTSSFLDPYSTPYFDTRSLQESQYGRKNLNYQHDHQSVYSGNLLEKVESSSRNFKEPKPQKTLSKPIEKFQTEVLPPKSAKSIPVTQHKLLSPIKGRGFVSSNNAAYIMEAAARIIEPGPHVVATKAKTPIIASPTVSLKVRDLKEKVEASQKAPLTRSSSMTFRARDPKANRELSQRTTRLSESSQKSVEANAAKYLKGQSLNKSWTGSVETSIRPPTYAEEDSSFKNKGKSISLAIQAKVNVQRREGLSTNGERSLAGQKEHLEVKPNQPSKANFQMNLHKKSSGQNTSGVLRQNNQKQNCSVDKDKLPSKSLATNSHGRKVLSGDSSSGRHRSSSSKSIGKSKAGSRKPGLEATDSEKEVSYTSTNSYPRKKRSTGRDWNDRVVDNLFTDKTLTHVQSNVVSNNHLSWAEEVKKKDMDVVSFTFTTPLTRNNAGFETSGQADQKTNGLSLDHRIKRVLLDADSTKSPVGYNVIGGDALGILLEQKLRELTFGVETSSQDSSKVKLPSSIASTSNDSLPSLNSVDIMPRYQQTKDQNVLFTDKMGIRHDHSDNTSTDLPELTLKHKSWIVDDMEECTSNHIESQLFNCRHPSPISVLEPSFSTESFESSVSTDATNSTEGSKLCLSAQVQEVLSLNCSRKFYPAEADTELSDSASSTSAGAMVKKHANAFSIMNFGRLSTWELDYVKVILSNVDLMFMDFALGRAREIVNPHLFNQLESRKGGFESDGGEPKLRRRVIFDCVSECLDLRCRRYVGGGYTMWTKGITMLRRKQFLAEEVYKEISGWGGMGDSMVDELVDKDMSSQYGRWLDFDVDAYELGAEIQNQILNSLVDDVVDDMLQI 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01309 950 MobiDBLite consensus disorder prediction 255 297 - -
Bva05g01309 950 MobiDBLite consensus disorder prediction 353 487 - -
Bva05g01309 950 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 948 - -
Bva05g01309 950 MobiDBLite consensus disorder prediction 35 54 - -
Bva05g01309 950 PANTHER EXPRESSED PROTEIN 1 948 - -
Bva05g01309 950 Pfam DUF761-associated sequence motif 82 112 IPR032795 -
Bva05g01309 950 MobiDBLite consensus disorder prediction 378 412 - -
Bva05g01309 950 Pfam Domain of unknown function (DUF4378) 791 942 IPR025486 -
Bva05g01309 950 MobiDBLite consensus disorder prediction 418 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01309 Bva-Chr5 6876191 6881044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01309 3 948 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.342 4.07e-104 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01309 - - gmx:102669513 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01309 05 6876191 6881044 Bva06g00271 06 4297854 4302651 BWGD
Bva05g01309 05 6876191 6881044 Bva05g01309 05 6876191 6881044 ECH