Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01302 ATGGCAAATAACTTAACGGGGCTGCTCGTGGGCTCCGAGATACATGGATTCCACACAATGCACGATCTGGATGTCGGGAACATTATGGGGGAAGCAACGAGCAGATGGCTTCGTCCCAATGAGATTCATGCAATACTCTGTAATTACAAGTATTTCACCATCAACGTCAAGCCAGTGAATTTGCCCAAAAGTGGCGCTATTGTATTATTTGATCGCAAGATGCTTAGGAACTTTCGGAAAGATGGGCacaattggaaaaagaaaaaggacgGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAGGTTGGTAATGAAGAAAGGATACATGTATACTATGCACATGGCCAAGATAACGCAAGCTTTGTCCGCAGATGTTATTGGCTGCTTGATAAGAGTCTGGAACACATTGTCCTTGTTCATTATCGCAAAACACAGGAGGTGCAAAGTTCTCCAGTCACGCCTGTCTATTCAAATTCTAGTTCTTCCTCTGATCCAACAGCTCCATTGGTTCTATCAGAAGAGTTAGATTCTGGGACCAACAATGCATATGCTAGTGAGCAAAATGACCATCTGACAGTTCAAAGGCATGAATTGAGACTTCATGAGATTAATACGCTTGAATGGGATGACCTAGTGGTTTCAAATGATCTTAACACCTCTATTGCACCTAATGGAGtttttgcaGGCAAAGTTCCATCTTATGATCAACAAAACCAAACGTTACTAAATGGCAGTTTGAGTAATGTGGCCAGTAATTCTTGTGTAGAAATGCCTTGTTTTAATAGTTTAACTGAGCCAACCATGGGGAGCAATATTACTCCTTACAATTTTCaagaaagttcaaattttcagaaatttgAAAGCCAAGTAGATCCAAATGTGCAGAAGGGACATCCTATCTCTATGTGTGGTACTGATTCCTTGGAAACTATGGTCAATGATAGTTTGCAAAGTCAGGACAGCTTTGGAAGGTGGATGAACCACCTCATGTCTGATTCACCATGTTCTGTGGATGGGTCCGCGATTGGTTCCTCTGTTTCATCTATTCATGAACCATATTCTTCTTTGGTAGTGGATGATCAACGACCTTCTTTGCCAGAACAAGTATTTAATGTCACTGATGTGTCGCCTGGATGGGCATCTTCCACTGAGAAAACCAAGGTACTGGTCACAGGGCTTTTTCGTGATGACCATCTACACCTTGCAAAGTCCAATCTATTGTGTGTCTGTGGTGATGTTATTGTTCCTGCAGAATTTGTTCAGGTTGGGGTCTACCGATGTTGGGTATCACCACATTCCCCTGGGTTCGTGAATCTCTATCTGAGCTTGGATGGCCATAAACCCATTAGCCAAGTTGTTAATTTTGAGTATCGCACTCCTGTTTTGCATGACCCTACAGCTTATTTAGAAGAGAAGTACAATTGGGAAGAGTTTCGACTGCAGATCAGACTCGCTATATTGCTCTTTTCTACGCAAAAGAGCCTTGACATTTTCTCTAGTAAAGTATCGTCTAAAGTACTCAAGGCAGCTAAGCAATTTGCCTTCAAAACCGCTTATATTTCCAACAGTTGGCAACCCTTGATCAAATCAATTGAAGACAACAAAACTCCATTTCCACAAGCAAAAGATTCCTTGTTTGAAATTGCATTCAAAAACAGACTAAAGGAATGGTTGTTGGAAAGGATTGTTTTAGGCTCTAAGACTACTGAATATGATGCTCAAGGTCAAGGTGTAATCCATTTGTGCACGATTTTGGGATATTCTTGGGCTGTTTCCTTATTTTCATGGTCAGGCTTGTCTCTGGATTTTCGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGTGAGAAAATGGTTGCAACTTTGTTGTCTGCTGGGGCAAAGCCAAACTTAGTCACAGATCCTAATCCACAAAATCCTGGTGGATGTACTGCTGCTGATTTGGCTTATATGAAGGGTTATGATGGCTTAGCAGCATATCTTTCTGAAAAGTCTCTGGTTGAGCAATTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCGCTAGAAACTAGGTCAGCTGCTCCAGTAAATTCCAAAAACCTCACTGAGGACGAGGTGTATCTGAAGGAAACATTGGCAGCTTACCAGACAACTGCTGAGGCAGCAGCACGCATACAAGTTGCATTTAGGGAGCGCACTCTAAAATTACGAGCTACAGCAGTTCGGTTTAGCAATCCTGAGGCCGAAGCTCAGAGAATAGTTGCAGCAATGAAGATTCAACATGCATTCCGCAACTTTGAGAGCAAGAAGAAGATGGCTGCTGCTGGTCGTATCCAGCACACCTTCCGTACATGGAAGATCCGTAAAGAATTTCTCCACATGCGTCGTCAGGTTATCAAAATTCAAGCTGCTTTTCGGGGTCACCAAGTGCGGAGGCAATATCGCAAAATTCTTTGGTCAGTTGGAGTGCTTGAAAAGGCAATCCTGCGTTGGCGTTTGAAGAGAAAAGGGTTCCGTGGGCTACAAGTTAACCCCGTTCAAAAAATGGAAGAGGAAAGGCAAGAAAGTGATGTGGAGGAGGATTTCTTCCAGACCAGCAGGAAGCAAGCTGAAGAACGTGTTGAGAGATCTGTGTTGCGTGTTCAGGCCATGTTCCGTTCCAAGAAAGCTCAAGAAGAGTATAGGAGGATGAAGTTGACCCATAATCAAGTAAAGCTGGAATATGAAGAAGAGCTTCTAAATCCTGATCCTGAGATGAAACAGTG 2768 0.4198 MANNLTGLLVGSEIHGFHTMHDLDVGNIMGEATSRWLRPNEIHAILCNYKYFTINVKPVNLPKSGAIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNASFVRRCYWLLDKSLEHIVLVHYRKTQEVQSSPVTPVYSNSSSSSDPTAPLVLSEELDSGTNNAYASEQNDHLTVQRHELRLHEINTLEWDDLVVSNDLNTSIAPNGGKVPSYDQQNQTLLNGSLSNVASNSCVEMPCFNSLTEPTMGSNITPYNFQESSNFQKFESQVDPNVQKGHPISMCGTDSLETMVNDSLQSQDSFGRWMNHLMSDSPCSVDGSAIGSSVSSIHEPYSSLVVDDQRPSLPEQVFNVTDVSPGWASSTEKTKVLVTGLFRDDHLHLAKSNLLCVCGDVIVPAEFVQVGVYRCWVSPHSPGFVNLYLSLDGHKPISQVVNFEYRTPVLHDPTAYLEEKYNWEEFRLQIRLAILLFSTQKSLDIFSSKVSSKVLKAAKQFAFKTAYISNSWQPLIKSIEDNKTPFPQAKDSLFEIAFKNRLKEWLLERIVLGSKTTEYDAQGQGVIHLCTILGYSWAVSLFSWSGLSLDFRDKFGWTALHWAAYCGSEKMVATLLSAGAKPNLVTDPNPQNPGGCTAADLAYMKGYDGLAAYLSEKSLVEQFNDMSLAGNISGSLETRSAAPVNSKNLTEDEVYLKETLAAYQTTAEAAARIQVAFRERTLKLRATAVRFSNPEAEAQRIVAAMKIQHAFRNFESKKKMAAAGRIQHTFRTWKIRKEFLHMRRQVIKIQAAFRGHQVRRQYRKILWSVGVLEKAILRWRLKRKGFRGLQVNPVQKMEEERQESDVEEDFFQTSRKQAEERVERSVLRVQAMFRSKKAQEEYRRMKLTHNQVKLEYEEELLNPDPEMKQ 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01302 919 Pfam Ankyrin repeats (3 copies) 554 634 IPR002110 GO:0005515
Bva05g01302 919 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Bva05g01302 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 916 - -
Bva05g01302 919 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Bva05g01302 919 ProSiteProfiles IQ motif profile. 792 816 IPR000048 GO:0005515
Bva05g01302 919 Gene3D - 532 674 IPR036770 -
Bva05g01302 919 MobiDBLite consensus disorder prediction 150 170 - -
Bva05g01302 919 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Bva05g01302 919 SMART iq_5 871 893 IPR000048 GO:0005515
Bva05g01302 919 SMART iq_5 768 790 IPR000048 GO:0005515
Bva05g01302 919 SMART iq_5 791 813 IPR000048 GO:0005515
Bva05g01302 919 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Bva05g01302 919 Gene3D Immunoglobulins 364 459 IPR013783 -
Bva05g01302 919 Pfam IQ calmodulin-binding motif 794 813 IPR000048 GO:0005515
Bva05g01302 919 ProSiteProfiles IQ motif profile. 769 798 IPR000048 GO:0005515
Bva05g01302 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 819 IPR027417 -
Bva05g01302 919 SMART CG_1_2 28 146 IPR005559 GO:0003677
Bva05g01302 919 SUPERFAMILY E set domains 369 456 IPR014756 -
Bva05g01302 919 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
Bva05g01302 919 SMART ANK_2a 644 675 IPR002110 GO:0005515
Bva05g01302 919 SMART ANK_2a 605 634 IPR002110 GO:0005515
Bva05g01302 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 15 916 - -
Bva05g01302 919 SUPERFAMILY Ankyrin repeat 544 667 IPR036770 -
Bva05g01302 919 Coils Coil 885 905 - -
Bva05g01302 919 Gene3D - 766 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01302 Bva-Chr5 6823230 6830873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01302 28 906 CAMTA Transcription Factor Family AT3G16940 55.846 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bva05g01302 Ank_2 2.9e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01302 K21596 - gmx:100793970 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01302 05 6823230 6830873 Bva06g00281 06 4346765 4355083 BWGD
Bva05g01302 05 6823230 6830873 Bva05g01302 05 6823230 6830873 ECH