Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01298 ATGGGCAGAGAACGACCAAGATCCCACCTTTATACTACTTGTCCTCTTTGGCATATAGCTGCAATTCAGCGTTTGCAAACGGGTCTTGGTTCAGCTTCCCCTTTGCTCCAAGAGATGGCCAAGTCGAAGAACCACACAGCGCACAACCAGTCCTACAAGGCTCACAAGAATGGCATCAAGAAACCTAGGAGGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTACGCTAGGAAGCACAACAACAAGAGTGGTGAAACAGCCACTGAGGAAGAGTG 299 0.505 MGRERPRSHLYTTCPLWHIAAIQRLQTGLGSASPLLQEMAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNNKSGETATEEE 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01298 99 PANTHER 60S RIBOSOMAL PROTEIN L29 39 99 - -
Bva05g01298 99 MobiDBLite consensus disorder prediction 78 99 - -
Bva05g01298 99 Pfam Ribosomal L29e protein family 41 80 IPR002673 GO:0003735|GO:0005840|GO:0006412
Bva05g01298 99 MobiDBLite consensus disorder prediction 48 70 - -
Bva05g01298 99 MobiDBLite consensus disorder prediction 41 99 - -
Bva05g01298 99 Gene3D - 39 99 - -
Bva05g01298 99 PANTHER 60S RIBOSOMAL PROTEIN L29 39 99 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01298 Bva-Chr5 6813967 6816246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01298 39 99 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 1.42e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01298 K02905 - gmx:100810108 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01298 05 6813967 6816246 Bva05g01298 05 6813967 6816246 ECH