Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01288 ATGGACTACCAACAGGAGTTGCTAGTGGGAAAGGTTTTAGAAATCTTCCAAAAAATCTCCAAGTTAGATAAACTCAATCCCTCCAAGCATGTCAATGTCCTTTTTACTCAACTAGTAACTACTTGCACCTCTCCATGCCCCATAGATGTTACAAGGCTAAGCATAGAAGATAGAGAAACCATTTCTAAGCTAATCAGACTATGTGGGAAAGCTGAGGGTCTCCTAGAAAGTCATTACTCTACTCTCATAGGATCAAATGAGAACCCTCTAAACCACATCAACCTCTTCCCTTACTACACCAATTACCTCAAACTTAGCCGTTTGGAGTTTACCATGCTCAGTACAAACTGCACTAAGGTTCCAACCCAAGTTGCCTTTGTTGGCTCTGGTCCCCTTCCTCTCACCTCAATCATCTTGGCCACATGCTACATGAGACATGCATGCTTCCACAACTATGATATTGACCCATCAGCAAATTCCAAAGCCTTTCGCTTGATTTCCTCGGATCCTGACTTGTCGAATAGAATGTTCTTCCACACTACAGACATAGCAAATGTGTCAAGTGGCCTAGAGGACTATGATGTTGTGTTCTTGGCAGCACTTGTAGGCATGGACGACAAGGAGAAGACTCAGATCATCAATCATCTAGGCAAGCACATGGCTCCTGGAGCTATTCTGTTGCTGAGAAGTGCACATGGAGCTCGAGCTTTCCTCTATCCGGTCGTTGATCCTTCTGGTCTCAAAGGCTTTGAAGTTCTCTCAGTTTTTCATCCAACTGATGAGGTTATAAACTCTGTCATTATTGCGCGAAAGCATGCAGTGAATCAGGAGCATTGCTCGCCGATGATTCCTAGCAAATGTTATGAAGTTGAAGGCTTTAATCCGCTGAACCATGGGAACGTCATTGAAGAGTTGACAATTGATGACAAGCAGACCTG 938 0.4382 MDYQQELLVGKVLEIFQKISKLDKLNPSKHVNVLFTQLVTTCTSPCPIDVTRLSIEDRETISKLIRLCGKAEGLLESHYSTLIGSNENPLNHINLFPYYTNYLKLSRLEFTMLSTNCTKVPTQVAFVGSGPLPLTSIILATCYMRHACFHNYDIDPSANSKAFRLISSDPDLSNRMFFHTTDIANVSSGLEDYDVVFLAALVGMDDKEKTQIINHLGKHMAPGAILLLRSAHGARAFLYPVVDPSGLKGFEVLSVFHPTDEVINSVIIARKHAVNQEHCSPMIPSKCYEVEGFNPLNHGNVIEELTIDDKQT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01288 312 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 232 IPR029063 -
Bva05g01288 312 PANTHER NICOTIANAMINE SYNTHASE 3 1 310 IPR004298 GO:0030410|GO:0030418
Bva05g01288 312 PANTHER NICOTIANAMINE SYNTHASE 1 310 - -
Bva05g01288 312 Pfam Nicotianamine synthase protein 4 274 IPR004298 GO:0030410|GO:0030418
Bva05g01288 312 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Bva05g01288 312 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01288 Bva-Chr5 6762452 6763390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01288 4 271 Nicotianamine Synthase Gene Family AT1G56430 61.255 2.48e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01288 K05953 - gmx:100814069 460.685