Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01287 ATGGAGGATCTGCGTGCTTTCATGGGGTTCAATGTTAGTGATGTTGACGATGAATATAGCTCATCAAATAATGCTAGTGATGTTGACGATGAATATAGCTCATCAAATAATGCCCATTGGAGTAGAAAGGGACTGAAGGAAGACGAAGAGGTTCAATTTTCTGAGGCTGAAGGTTGGGGAGACTCTGGAGAAGGATATATTTTAGCACCTGATCATCAACAAAAGGATAACTTGGCATTCGATACGGTCTCTCCATCACTGTCAACTGTAGATATAATAAGAATAGCTGGAAAGAAGTTCGTCGGATCATCTTCAGAATCAGTTGATTTTCAGTCATTGACAAGCCATGCCTatgattcttctttctttagaCTCTCtaatgaagagaaagaggatGTTGGACTTGTTGAATCCCTTTTGGCTTCTGCTGGGAAAGTAGCCCATCAACAGTTTGAACTCGCAAGCACATTGCTTAATCATTGCCATTCGTTATCTTCCAAGACTGGGAATGCAGTTAAGCGtgttgtttcttatttttctgaagCACTTCGCGGGAGGTTAGACcgagaagaaggaaaaatctCAGCAGAGGTTTTGTCTCAAAGACAGTCATTTCATCCAGATGATCAAGCATTCATGAATCTCGACCCCAGTTTTTTAGCATATCATGTACTGCTTCCTTTTTGtcaagtttctttcttttgtggaATCCAAGCTATAATAGAAAATGTAAAGGGTGCAAAGAAGATTCATGTTATTGATTTTGCAATCAGAAGGGGGGTGCAGTGGTCAATCCTGATGCAAGCCCTTGAATCTCGACATGAATGTCCAGTTGAGCTTCTGAAAATATCAGCCATTGGCACTACTTCAAAGAATTCACTAGAGGATGCAGGTAAAAGACTGATGAATTTTGCTGAAACCATGAACATACCCTTCTCCTTCAACATTGTTATGGTATCAAACATGCTTGATCTCCATAAAAATCTCTTTGTGATAGATCCTGAGGAAAAACTTGTAGTTTACTCTAATACAATACTGAGGAGCATGCTTTCACAACCAGGCCGTCTTGAATCTGTTATGAAAGTGATTCAAAGCATCAATCCTGCTATAATGGTGGTTGCTGAAATTGAGGCAAAACACAATGCAGCCTGTTTTGTGAACCGTTTCACTGAAGCTCTTTTCTATTTCGGTACATACTTTGATTGCGTCGAGGCTTGTATGAAAAAGGATGATCCAAACAGAATGATTCTTGAATCAGCATACTTTGGCCAAGGGATTAGAAATATTGTGGCAATGGAAGGAGAAGAGAGGAAGGTTCGAAATGTAACGGTTGATGTTTGGAGGGCTCTCTTCGAGCGGTTTGGAATGGTGGAGAAAGAATTAAGCGTGTCATCGTTATATCAATCGGAGCTGGTGGCTAAAAGATTTGCTTGTGGAAGTTCTTGTACATTtggaatgaataaaaattgccTGCTTATTGGATGGAAGGGTACACCACTTCATTCTCTTTCTGTTTGGGAATTTCTTGATGATGACGATGATGATGGAGAGTA 1553 0.376 MEDLRAFMGFNVSDVDDEYSSSNNASDVDDEYSSSNNAHWSRKGLKEDEEVQFSEAEGWGDSGEGYILAPDHQQKDNLAFDTVSPSLSTVDIIRIAGKKFVGSSSESVDFQSLTSHAYDSSFFRLSNEEKEDVGLVESLLASAGKVAHQQFELASTLLNHCHSLSSKTGNAVKRVVSYFSEALRGRLDREEGKISAEVLSQRQSFHPDDQAFMNLDPSFLAYHVLLPFCQVSFFCGIQAIIENVKGAKKIHVIDFAIRRGVQWSILMQALESRHECPVELLKISAIGTTSKNSLEDAGKRLMNFAETMNIPFSFNIVMVSNMLDLHKNLFVIDPEEKLVVYSNTILRSMLSQPGRLESVMKVIQSINPAIMVVAEIEAKHNAACFVNRFTEALFYFGTYFDCVEACMKKDDPNRMILESAYFGQGIRNIVAMEGEERKVRNVTVDVWRALFERFGMVEKELSVSSLYQSELVAKRFACGSSCTFGMNKNCLLIGWKGTPLHSLSVWEFLDDDDDDGE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01287 517 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 80 507 - -
Bva05g01287 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 80 507 IPR005202 -
Bva05g01287 517 MobiDBLite consensus disorder prediction 15 40 - -
Bva05g01287 517 MobiDBLite consensus disorder prediction 14 55 - -
Bva05g01287 517 Pfam GRAS domain family 135 507 IPR005202 -
Bva05g01287 517 ProSiteProfiles GRAS family profile. 126 507 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01287 Bva-Chr5 6760426 6761979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01287 125 508 GRAS Transcription Factor Family AT3G03450 30.534 2.52e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva05g01287 GRAS 4.4e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01287 - - gmx:100798926 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01287 05 6760426 6761979 Bva05g01287 05 6760426 6761979 ECH