Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01280 ATGAGATCCAATTCCCACGTTTTATTTTCCGTCATTCTCTTATCATTCACCATAAACATCATCCATGTTCGAAGCATGGGAAAATCAGAATCGGATTCTGGTTCCTTCCTCATTTCCTGTGGTTCTTCCGATGGTGGCACCGACGCTGATGGACGAAAATGGGTGCCAGATTCTCCATATCTAAATTCTTCTGCAATATCAATAAACTCAACAGCCCAAACCCAAGACCCTTCTTTACCTTCCCAAATACCTTACATGTCTGCAAGAATTTTCACTTCCCCATCCACATACCAATTCCCCGTTTCACCAAAGAAACGCCTTTGGCTTCGCCTCTATTTTTACCCTTCCACTTACTCCAATTTCAGCTCCTCGGATGCCTATTTTGCCGTCGTCGCAAATGGGTTCACTCTCCTCAACAATTTCAGCGCCTTCATTTCAGCAAAAGCTCTAACACAAGCCTATTTCATCAAAGAGTACTCCCTCACGCCTGTTCATTCTGGTAAACTCGAGATCACCTTCACACCCTCTTCACAACACAGTGGATCTTATGCTTTCATCAATGGCATTGAGATCATCCATATGCCTCATATATTCAAGGAAGCCTCTTGGGTTTCTTACCTCGGTCAAACTCTGGATCTTGGAACCTACTCTTTTCAAACCATGTTCAGGTTAAATGTTGGAGGCCAGTACATTGGACCCACCGGTGATTCTGGCCTTGGCAGGATTTGGTATGATGATTCTCCCTATTTGTATGGTGCAGCAGATGGGGTCACTTACGAGAAAGATAAGGATATGAAAATTCAGTACTCTTCTAATATACCGGAGTACATTGCTCCTGTTGATGTTTATAGCAGTGCAAGATCCATGGGTCCAAATCCTAGTGTCAATGAGAACTATAACCTCACTTGGATTTTTCAAGTTGATGCAAATTTTACTTATCTGGTGAGGTTACATTTTTGTGAGCTCCAATTTACAAAGATTAATCAGAGagtgtttgatatttttgttagcAATCAAACAGCAGAGATTGGTGCAGACGTTATCGGGTGGGTGGGATCAAAGGGTGTTCCTATTTATAAAGATTATGTAACTTATGTCACAGATGATCCTGGTGATGAGGAATTGTGGGTGGCCTTGCACCCTACGGTGTCGGAGAAACCTCAATATTATGATGCAGTTCTTAATGGTTTGGagatttttaagattaatgaTAACATGAGGAACTTGGCAGGGCTTAATCCCACGCCATCAGAGATGCTTCTTGAAGCTGAAGCTCAAGTATTTGGAGATTCTAGCCCATCAAACCATAATCCAGGTAAAGTAATAGGAGGTGTTGCTGGTGCAGCTGGGCTTGCTGTCGCTGCTGCTGCTGTCTGCTTCATTGCctatgaaagaaagaaaagaaaggctCATGGAACAGGCTCTTCTGTTGGTAGTGGGTTACCTATCTATGGTAAATGTCAGATATCAACAGGCAAGTTAACTATTTCTGGCAAGGGCAGTAGTCAAATTTCAACTCTCAGAGGTCATTTTTGCTGCCATTTTTCGTTGTCAGAGATTAGAAATGCTACAAAGAACTTCAATGAATCAGAGGTTATAGGTGTTGGTGGGTTCGGGAAGGTTTACAAAGGAATCATAAATGGAGGGACCAAAGTGGCCGTGAAAAGATCAAATCCATCTTCACAGCAAGGAGTCAGGGAATTTCAGGCTGAAATTGACATGCTTTCCAAGCTAAGGCACCGGCATTTAGTCTCCCTAGTTGGGTTTTGTGAAGAGAATGGAGAAATGATCTTAGTGTATGACTACATGGCTAGAGGAACTCTCAGAGAGCACCTTTATAAGAACAATAAATCAACTTTGCCTTGGAAGCAAAGGCTAGAAATATGCATTGGAGCTGCAAAGGGACTGCACTATCTTCACACTGGTGTTAAGTACACAATCATCCACCGGGATGTGAAATCCACAAATATACTATTGGATGAGAATTGGGTAGCAAAAGTTTCTGATTTTGGGTTATCAAGAACTGGCCCCAGTCTTCACCAAACCCATGTGAGCACATTGGTGAAAGGTAGCTTTGGTTACTTGGATCCTGAGTACTTTCGCAGACAACaattaacagaaaaatctGATGTTTACTCTTTTGGAGTAGTTCTTTTTGAGGTGTTATGTGCAAGGCCTGCACTTGATCCTAGTTTGCCAAAAGAACAAGTTTGCTTATCAGATTGGGCTTTGCTGTGCCAAAAGAATGGAAATCTTGTAGACATTATTGATCCTCAGCTTAAAGGCAAAATCAACCTTGAGAGCATGAACAAGTTTGCAGACACGGCGTGTAAGTGTTTGGCAGATCAAGGCCTTGAACGTCCTTCAATGGGTGATGTGCTGTGGAACCTTGAGTTTGCACTTCAGTTGGAAGAGAATCCTTATGATGGGAAATGTGCAGAAGAGAAGGCAAATGATGCTTATGCTATGCACAGCTTCTCGTTGACAACTGAGGAAGAAAGGACAAGCAGTGAGCTTGAGGATTCAAGCAACAGTGCAATTTTTTCACAACCTGCGGATCCCAATGGAAGATA 2573 0.4151 MRSNSHVLFSVILLSFTINIIHVRSMGKSESDSGSFLISCGSSDGGTDADGRKWVPDSPYLNSSAISINSTAQTQDPSLPSQIPYMSARIFTSPSTYQFPVSPKKRLWLRLYFYPSTYSNFSSSDAYFAVVANGFTLLNNFSAFISAKALTQAYFIKEYSLTPVHSGKLEITFTPSSQHSGSYAFINGIEIIHMPHIFKEASWVSYLGQTLDLGTYSFQTMFRLNVGGQYIGPTGDSGLGRIWYDDSPYLYGAADGVTYEKDKDMKIQYSSNIPEYIAPVDVYSSARSMGPNPSVNENYNLTWIFQVDANFTYLVRLHFCELQFTKINQRVFDIFVSNQTAEIGADVIGWVGSKGVPIYKDYVTYVTDDPGDEELWVALHPTVSEKPQYYDAVLNGLEIFKINDNMRNLAGLNPTPSEMLLEAEAQVFGDSSPSNHNPGKVIGGVAGAAGLAVAAAAVCFIAYERKKRKAHGTGSSVGSGLPIYGKCQISTGKLTISGKGSSQISTLRGHFCCHFSLSEIRNATKNFNESEVIGVGGFGKVYKGIINGGTKVAVKRSNPSSQQGVREFQAEIDMLSKLRHRHLVSLVGFCEENGEMILVYDYMARGTLREHLYKNNKSTLPWKQRLEICIGAAKGLHYLHTGVKYTIIHRDVKSTNILLDENWVAKVSDFGLSRTGPSLHQTHVSTLVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALDPSLPKEQVCLSDWALLCQKNGNLVDIIDPQLKGKINLESMNKFADTACKCLADQGLERPSMGDVLWNLEFALQLEENPYDGKCAEEKANDAYAMHSFSLTTEEERTSSELEDSSNSAIFSQPADPNGR 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01280 857 CDD STKc_IRAK 533 798 - -
Bva05g01280 857 Pfam Malectin-like domain 38 402 IPR024788 -
Bva05g01280 857 Gene3D - 33 195 - -
Bva05g01280 857 Gene3D - 217 403 - -
Bva05g01280 857 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Bva05g01280 857 Gene3D Transferase(Phosphotransferase) domain 1 603 821 - -
Bva05g01280 857 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Bva05g01280 857 MobiDBLite consensus disorder prediction 823 857 - -
Bva05g01280 857 ProSiteProfiles Protein kinase domain profile. 527 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01280 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Bva05g01280 857 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 27 823 - -
Bva05g01280 857 Pfam Protein tyrosine and serine/threonine kinase 530 791 IPR001245 GO:0004672|GO:0006468
Bva05g01280 857 SMART serkin_6 527 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01280 857 MobiDBLite consensus disorder prediction 840 857 - -
Bva05g01280 857 SUPERFAMILY Protein kinase-like (PK-like) 502 800 IPR011009 -
Bva05g01280 857 PANTHER OS07G0166700 PROTEIN 27 823 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01280 Bva-Chr5 6726872 6729884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01280 31 857 Receptor kinase-like Gene Family AT3G51550 53.563 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva05g01280 Malectin_like 2e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01280 - - qsu:111989013 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01280 05 6726872 6729884 Bva05g01280 05 6726872 6729884 ECH