Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01274 ATGGGAACCCCGCCGACAGAAGAGCTTCTCAAGAAGATCGAAGAGCTTCTCAAGAAGATCGAAGAGCTTGAGGTGGGTCACGCCCGCCTCAAGCAAGAAATGACTAAGATTAAGCTCTCTGGCGATGCCAAAGTGGAACATGGTCATCGTCAGAGGTCTCATTCGATATCACCGCAGCGTTCGAGATTGGCAACGCTGAGGAGGAGAGCTGGAGGTGGCGGATTGGATGGACCAACAACGTGGAAGAAAGGGTCGTCTTCGTTTAAACAATCTTCCCCGTTGCAGAGGGAGAGTCGTGGTGATCCTCAAAATGATGGAGATGGTGGCGTTGTCAGCGGCCCTTCAGCTGTAAAATTTACTGATAAGCAGTATCTGAATATTTTGCAGTCAATGGGACAATCTGTTCATATACTGGATCATAATTGTCGTATAATATACTGGAACCGCAGCgctgaaaatatatatggttattCAGCAGGGGAAGCCCTTGGCCAGGATGCCACTGAACTACTCGTAGACCCCAGGGATTCTACTTTAGCCAATGATATTGTCAACCGTGTTACAATGGGAGAGAGCTGGACGGGGCAGTTCCCTGTCAAGAATAAGATGGGAGAGAAGTTTTTAGCTGTAGCAACCAATACTCCTTTCtatgatgatgatggaagTTTGGTTGGGATTATTTGTGTATCAAGTGATTCACGGCTGTTTCTTGAAACGAGAGTTCCTTTCTCAGCTGTGACACATAGTGAAGCAGATTCAAGCTCCACCCATCCTAGAAGTACTGTTGCAACCAAACTTGGTCTGGATTCTCAACAGCCTCTTCAAGTTGCTTTAGCAtcgaaaatttcaaatttggCATCAAAAGTGAGTAACAAAGTTAAGTCAAGAATTCGAACAGGAGAAAATAATATGGACCGTGAAGGTGGGAGTGGAGATAGTCATCATTCTGAGCAGAATTTTTCTGATTCTGTTCTGGATCAGAGAGAGGATGCTAATTCCAGTGGAGCAAGTACACCTAGAGGAGATGTGCCACCATCACCTTTTGGTACATTACCTCACATTGAAGAGAAACCACAAGGAAAAACTTCTAGAGACTCTGGTGatgaaagtgaaggaaaacCTATTCACAAGATCATAACTTCCAAAGCTGAAGCATGGATTAACAAGAAAACACTATCTTGGCCATGGAAAGGGAATGGCCGAGATGGGTCAGAGGCAAGGAATGTCCGTGTTGCTTGGCCTTGGCTACAGAATGATCAAGAAAATGAGCCAGTTCATCAGAAGAGCCTTTCTTCTGGGGTGAAGCTAGAAAGCCAAACAGGTGAAAGTAATCGACCTGTTAATAACGAGGCCTCAGGATCCTGGTCTTCGTCCTTCAATGTCAACAGCACAAGCAGTGCCAGCAGCTGTGGCAGTGCTAGCAGCAGTGCCATCAATAATAAAGTGGATATGGATACTGATTGCTTGGATTATGAAATCTTGTGGGAGGACTTGACAATTGGAGAACAAATTGGGCAAgGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGACGTTGCTGTCAAGGTATTCTCCAAGCAAGAATATTCTGATGATGTGATAATGCCCTTCAGACAAGAGGTATCTCTTATGAAAAGACTTAGGCATCCAAATGTTCTTCTCTTTATGGGGGCAGTAACATCACCTCAACGTCTCTGCATTGTGACAGAGTTCCTCCCAAGaGGAAGCTTATTTCGCTTACTCCAGAGGAACGCAGCCAAACTAGACTGGAGACGTCGAGTTCATATGGCCCTGGATATTGCAAGAGGTGTAAATTATCTTCATCATTGCAATCCACCCATCATTCATCGAGATTTGAAGTCTTCAAATCTTTTAGTTGATAAGAACTGGACTGTGAAGGTTGgtgattttggtctttcatgtCTAAAGCACGGAACATATCTCACAACCAAGACAGGAAAAGGCACGCCCCAATGGATGGCACCAGAAGTTCTCCGTAATGAACCCTCAGATGAGAAGTCTGATGTATATAGCTTCGGGGTGATATTGTGGGAACTTGCAACTGAAAAAATCCCGTGGGATAGTCTCAACTCAATGCAGGTGATTGGAGCTGTGGGATTCATGGACCAGCGGCCAGAAATTCCAAAAGATATTGATCCAAGATGGACTGCTATAATGGAGAGCTGCTGGCATAGTGATCCAGCTTGTCGGCCTACATTCCAGGAACTGTTGGAAAGACTCAAAGATCTTCAGAGACAGTATCTGACTCAATTCCAGGCGGCGCGATCCGCAGGTGCTGAAAAGGAATCATA 2321 0.4356 MGTPPTEELLKKIEELLKKIEELEVGHARLKQEMTKIKLSGDAKVEHGHRQRSHSISPQRSRLATLRRRAGGGGLDGPTTWKKGSSSFKQSSPLQRESRGDPQNDGDGGVVSGPSAVKFTDKQYLNILQSMGQSVHILDHNCRIIYWNRSAENIYGYSAGEALGQDATELLVDPRDSTLANDIVNRVTMGESWTGQFPVKNKMGEKFLAVATNTPFYDDDGSLVGIICVSSDSRLFLETRVPFSAVTHSEADSSSTHPRSTVATKLGLDSQQPLQVALASKISNLASKVSNKVKSRIRTGENNMDREGGSGDSHHSEQNFSDSVLDQREDANSSGASTPRGDVPPSPFGTLPHIEEKPQGKTSRDSGDESEGKPIHKIITSKAEAWINKKTLSWPWKGNGRDGSEARNVRVAWPWLQNDQENEPVHQKSLSSGVKLESQTGESNRPVNNEASGSWSSSFNVNSTSSASSCGSASSSAINNKVDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMPFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNAAKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSCLKHGTYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDSLNSMQVIGAVGFMDQRPEIPKDIDPRWTAIMESCWHSDPACRPTFQELLERLKDLQRQYLTQFQAARSAGAEKES 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01274 773 CDD STKc_MAP3K-like 504 750 - -
Bva05g01274 773 MobiDBLite consensus disorder prediction 418 456 - -
Bva05g01274 773 MobiDBLite consensus disorder prediction 80 99 - -
Bva05g01274 773 MobiDBLite consensus disorder prediction 40 113 - -
Bva05g01274 773 Gene3D Transferase(Phosphotransferase) domain 1 576 773 - -
Bva05g01274 773 ProSiteProfiles PAS repeat profile. 120 191 IPR000014 -
Bva05g01274 773 SMART pas_2 122 188 IPR000014 -
Bva05g01274 773 MobiDBLite consensus disorder prediction 325 340 - -
Bva05g01274 773 MobiDBLite consensus disorder prediction 420 456 - -
Bva05g01274 773 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 35 769 - -
Bva05g01274 773 MobiDBLite consensus disorder prediction 292 374 - -
Bva05g01274 773 Pfam PAS domain 135 232 IPR000014 -
Bva05g01274 773 MobiDBLite consensus disorder prediction 294 324 - -
Bva05g01274 773 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 769 - -
Bva05g01274 773 Pfam Protein tyrosine and serine/threonine kinase 498 750 IPR001245 GO:0004672|GO:0006468
Bva05g01274 773 SUPERFAMILY Protein kinase-like (PK-like) 483 750 IPR011009 -
Bva05g01274 773 SMART serkin_6 498 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01274 773 TIGRFAM sensory_box: PAS domain S-box protein 122 232 IPR000014 -
Bva05g01274 773 CDD PAS 131 232 IPR000014 -
Bva05g01274 773 Gene3D PAS domain 132 235 - -
Bva05g01274 773 Gene3D Phosphorylase Kinase; domain 1 491 575 - -
Bva05g01274 773 PRINTS Tyrosine kinase catalytic domain signature 721 743 IPR001245 GO:0004672|GO:0006468
Bva05g01274 773 PRINTS Tyrosine kinase catalytic domain signature 572 585 IPR001245 GO:0004672|GO:0006468
Bva05g01274 773 PRINTS Tyrosine kinase catalytic domain signature 677 699 IPR001245 GO:0004672|GO:0006468
Bva05g01274 773 PRINTS Tyrosine kinase catalytic domain signature 658 668 IPR001245 GO:0004672|GO:0006468
Bva05g01274 773 PRINTS Tyrosine kinase catalytic domain signature 611 629 IPR001245 GO:0004672|GO:0006468
Bva05g01274 773 MobiDBLite consensus disorder prediction 357 374 - -
Bva05g01274 773 Coils Coil 6 33 - -
Bva05g01274 773 SUPERFAMILY PYP-like sensor domain (PAS domain) 126 229 IPR035965 -
Bva05g01274 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Bva05g01274 773 ProSiteProfiles Protein kinase domain profile. 498 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01274 Bva-Chr5 6690182 6696049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01274 1 767 MAP Kinase Kinase Kinase AT3G06620 62.389 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva05g01274 PK_Tyr_Ser-Thr 8.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01274 - - gmx:100800867 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01274 05 6690182 6696049 Bva05g01274 05 6690182 6696049 ECH