Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01272 ATGGCTTCTCAatattcatcttctttgcatGCTTCAACAATGTTCATGGCACTGATAATCCTTTGCATGATCTCATTCTTCTGCCTCCCATATGATACTCTTGCCATAGATGCACAAACGGTCATAGATTCTCCTTTGTTAACCAAAAAGATAGGCACAAATAGGACTATCAAGGTGGATATCAATGGCAATGGTGAATTCAAATCTGTCCAAGCTGCCATAGATTCCATTCCTGAAGGGAATTCTAATTGGGTTATTGTCCATATTAGGAAAGGAATATACAGGGAAAAGGTACACATACCAAAGAGCAAGCCCTACATATTCTTGAGAGGGAATGGAAGAGGAAGAACTGCCATAGTTTGGTCCGAGAGCTCTGAAGACAATGTGGCTTCTGCTACCTTCAAGGGTGAAGCTCATAATTTCATTGCCTTTGGCATTAGCTTCAAGAATGATGCACCAACTGGGATTGCTTATACCTCGCAAAATCAATCAGTAGCAGTATTTGCTGCAGCAGACAAGATGGCATTTTACCACTGTGCATTTTACAGCACACATAACACTCTATTTGATTACAAAGGCAGGCATTACTACGACTCCTGCTACATTCAAGGTTCAATTGACTTCATATTTGGCCGTGGCAGATCCCTCTTTCGTAGCTGTGAGATATTTGTTATTGATGACAAAAGGGTTTCAATTCATGGGTCAATCACAGCTCATAATcgagaaagtgaaaaagaggATAGTGGGTTTGTGTTTCTCAAAGGCAGGGTCTATGGCATTGGTGGTGTGTACTTGGGAAGGGCTAAGGGTGCATATTCTACGGTGCTTTTTGCCAAGACATACCTCTCCAAGACCATTGTGGCTGCGGGCTGGACTAATTGGAGCTATGCTGGTGGCACAGAGAATCTATTTCATGCGGAGTACAAGTGCCATGGACCTGGATCTGACTTAAATGGACGTGCTTCTTGGTCAAAGCAGCTTACAGACAAAGAAGCTGCTTCCTTTATCTCTGTTGAATATATTGATGGCCCGAAATGGCTGCCAGTCTGGCTATA 1055 0.4142 MASQYSSSLHASTMFMALIILCMISFFCLPYDTLAIDAQTVIDSPLLTKKIGTNRTIKVDINGNGEFKSVQAAIDSIPEGNSNWVIVHIRKGIYREKVHIPKSKPYIFLRGNGRGRTAIVWSESSEDNVASATFKGEAHNFIAFGISFKNDAPTGIAYTSQNQSVAVFAAADKMAFYHCAFYSTHNTLFDYKGRHYYDSCYIQGSIDFIFGRGRSLFRSCEIFVIDDKRVSIHGSITAHNRESEKEDSGFVFLKGRVYGIGGVYLGRAKGAYSTVLFAKTYLSKTIVAAGWTNWSYAGGTENLFHAEYKCHGPGSDLNGRASWSKQLTDKEAASFISVEYIDGPKWLPVWL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01272 351 PANTHER PECTINESTERASE 67-RELATED 16 350 - -
Bva05g01272 351 ProSitePatterns Pectinesterase signature 2. 202 211 IPR033131 -
Bva05g01272 351 Gene3D - 51 350 IPR012334 -
Bva05g01272 351 SUPERFAMILY Pectin lyase-like 53 349 IPR011050 -
Bva05g01272 351 Pfam Pectinesterase 58 343 IPR000070 GO:0030599|GO:0042545
Bva05g01272 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01272 Bva-Chr5 6682049 6684728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01272 3 347 Carbohydrate Esterase AT5G47500 36.088 1.59e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01272 - - mtr:MTR_2g033970 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01272 05 6682049 6684728 Bva05g01272 05 6682049 6684728 ECH