Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01268 ATGCTTCAGGCATTGATGAATCTGCTCTCTCCGTGTTGGAAGCCATTCGGGCGCGGTTCTGAGAACTTAGATTCTATTGCGGTGGTCGGGGGCAATTTTGGTGGTGGGGCAGGTGGAAGAGAAGGTAAGGATGGCTTACTTTGGTTCCGGGATATCGGAAAGTATGGCTCCGGCGACTTCTCGATGGCAGTGGTCCAAGCAAACCAGGTCCTCGAAGACCAGAGCCAGATCGAGTCTGGCCCTTTGGGAACCTTCGTCGGTGTCTACGATGGACATGGTGGCCCCGATGCATCTCGATATGTCTGTGATAACTTGTTCCGACATTTTCAAGCAATATCAGCTGAGTCACGGGGTGTTGTGACAACTGAGACCATTCAAAGAGCATTTCTCCAGACAGAAGAGGGGTTCACTGCCCTTGTGTCAGAATTATGGAGTACTCGACCGAGTATGGCAACTGTTGGGACATGTTGTCTAGTAGGAGTGATATTTCAGCAGACCCTCTTTGTGGCAAACCTAGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAACACCGGAGGTATGGCTGCAATTCAGCTATCTACAGAACACAATGCAAATATTGAGACAATCAGGCATGAACTTAAGGAATTACACCCAGACGATCCCCAAGTTGTTGTCCTCAAACATGGAGTGTGGAGAGTTAAAGGCATTATTcagGTCTCTAGATCTATAGGTGAcgtatatatgaaaaatgcgCAGTTTAACCGGGAACCAATTAATGCAAAATTCAGACTTCCTGAACCAATGAACTTGCCAGTCTTGTCTGCTAATCCAACCATTCTTTCTCATCCTCTCCACCCAAATGATTCCTTCCTTATATTTGCGTCAGATGGTTTATGGGAGCACCTGAGTAATGAAAAAGCAGTAGATATTGTTCAAAGCAATCCACGTACGGGTAGTGCCAAGAGGCTTGTGAAGGCTGCCCTCCACGAAGCAGCAAGAAAACGGGAAATGCGATATTCAGATCTCAGGAAGATTGACAAGAAGGTCCGACGCCATTTTCACGATGATATAACTgttattgttttattcttaaacCACGACCTTATATCCAGAGGCATGGTGATAGACCCTCCTCTCTCAGTTCGAATGCCAGAAAGGAAAGACACACTGGTTTGTATTGTGGCTTCAAGGTTACCGTTGACGCTGGATTCCTACCTTTTGGTCCCTGCTACTGAGAGATTACCGTTGACACTGGATTCCGACCTTTTGGTCACTGCTACTGAGAAATTACTTATTGAGGCTCAGGCTGAGCTACGGCTAACTCTGAATAACAAAACTCTTCAATCTTTTGCATCCTATGCTATCTTCATCTGCGCTATGGCTTCCAAAATCTCAAACTCAAGCTCATTCCTGTACTCCTTCATTCTCGCACTGAGTTTTCTCTTGACTCTGTCCGAGTCGGCCCCGCAAGCTTTCCGTAGAGAACCTGGTCACCCTCAATGGCACCACGGAGCTTTCCACGACGTCCGAGATAGCGTCCGATCCGATGTTCGGCGCATGCTTCATTCTCGGGCTGAGGTTCCATTTCAAGTTCCGCTAGAAGTGAATATAGTTCTTATCGGTTTCAATAAAGATGGTGGCTATAGATACTCTGTTGACCCGCATCAATTGGAACAGCTTCTTAAAGTCAGCTTTCCTACTCACAGACCATCTTGCTTAGAGACTGGGGAGCCCCTTGATATTGAGCATCACATCGTCTATAATGCATTTCCTGCTGGACAGCCAGAGCTGATAGCACTTGAGAAAGCAGTAAAAGAGGCTATGGTCCCTGCTGGAAAAGCAAGAGAGACTGACTTTGGAAGGGAGGTACCTTTGTTTGAAGTTGAAGCTGCATCTGTGGAGCCTATATTTCAGATGCTGTACTCCTACATTTTTGACACAGATAGTCAGGAAAATTCAGTCACAGAGAGCGATAAACCAGCACCAAATGcaatatttattctaaactTTGATAAGGTGAGACTGGATCCTAGGAATAAAGAAATCAATCTTGATAGTTTAATGTATGGCAGACTTCCAGAGCTAACCGAGGAAGATATCAAGGAACAAGAAGGAGATTACATTTATCGTTATCACTACAATGGTGGTGGTTCTTCTCAAGTTTGGCTGGGATCTGGCAGATTTGTGGTGATTGACCTCTCAGCTGGGCCGTGCACTTATGGGAAGATTGAAACTGAAGAGGGAAGTGTCAGTTTTAGAAGTCTGccaagattaaaaaatgtgaTGCGTCCAAGAAGTATGGGCACAGCTGATCAATCCAGCAGTGACATTTTTCTTGGACAGCTTGCTTCTTTGATATCAACCACAGTGGAGTATGTTATAGCTCCAGATGTGAGATTTGAAACTGTTGATCTGACTTCAAGATTGCTTATACCAATAATTGTCTTGCAAAATCACAACCGATACAATATTATGGAACAGGGTCATAATTATAGTATTAATGTAGAAGCAATTGAAACAGAGGTGAAAAAGATGCTTCATTATGGGCAAGAAGTAGTAATTATTGGAGGAGCACATTCACTACATCGCCATGAAAAGTTGGCAATTGCTGTTTCAAAAGCCATGCGGGGACATTCCCTGCAAGAAACCAAGAATGATGGTCGTTTCCATGTTCATACCAAGACATATCTAGACGGTGCTCTTTTGAAAGAAGAGATGGAACATTCTGCTGATGTGCTTGCTGCTGGGTTGCTTGAAGTAGCTGACCCATCTCTTTCTAGTAAATTTTTCCTTAGGCAGACTTGGTTGGATGAATCTGAAGGGTCAAGTGATTCTATTCTTAAGCATAAGCCTCTTTGGGCTTCTTATGACTCAAAACGTGGCaagaaaaggaggaagaaagtAAAGAAACAAGGGGATCTGCAACCAACTTATGGAACAAGAGTAATTCCTGTTTTTGTTCTATCATTAGCAGATGTGGATCCAAATCTTATGATGGAAGATGATAGCCTGGTGTGGACAAGCAATGATGTTGTAATTGTGCTTGAgcatcaaaatgaaaagattcCTCTAAGTTATGTTTCAGAAACACAGAGAAGGCACACTCTTCCATCTCAGGCTCAACGACATATATTGGCAGGTCTGGCTTCAGTTGTTGGTGGTTTAAGTGCACCATATGAGAAGGCTTCTCATGTGCATGAAAGACCAGTTGTAAATTGGCTTTGGGCAACTGGTTGTCATCCATTTGGACCATTCTCTAATACATCTCACATCAGTCAAATGCTCCATGACGTTGCTTTGAGAAATACAATATATGCACGGGTGGATTATGCACTTCATAAAATTCGTGAAACATCAGAGACCGTTCAATCTTTTGCAGCGGAATATCTGAAAACTCCCCTTGGAGAACCGGTGAAGGGAAAGAAGGAGAAGTCAAACACACAGCTATGGTTGGAGAAGTTCTACAAGAAAACTACTAACTTGCCTGAGCCCTTCCCGCATGAGCTAGTTGATCGCTTGGAAAAATATCTTGATGGTCTGGAGGAGCAGCTTGTTGACGTGTCTTCATTATTGTATGATCATCGGTTACAAGATGCCTTCTTGAACAGTTCAGACATTTTGCAGAGTACCAGGTTCACCCAACAATATGTTGATCACGTTTTGGACAGTGAGGGGGAGAAAATGAGATGCTGCGACATTGAGTACAAGTACCCTGCACACTCTTCTCAAGCTTATATCTATGGGGGAATCCTGATTGCTGGGTTCTTTGTATACTTcgttgtaattttcttttcatctccaGTACGCTG 3797 0.4267 MLQALMNLLSPCWKPFGRGSENLDSIAVVGGNFGGGAGGREGKDGLLWFRDIGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDNLFRHFQAISAESRGVVTTETIQRAFLQTEEGFTALVSELWSTRPSMATVGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGMAAIQLSTEHNANIETIRHELKELHPDDPQVVVLKHGVWRVKGIIQVSRSIGDVYMKNAQFNREPINAKFRLPEPMNLPVLSANPTILSHPLHPNDSFLIFASDGLWEHLSNEKAVDIVQSNPRTGSAKRLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGMVIDPPLSVRMPERKDTLVCIVASRLPLTLDSYLLVPATERLPLTLDSDLLVTATEKLLIEAQAELRLTLNNKTLQSFASYAIFICAMASKISNSSSFLYSFILALSFLLTLSESAPQAFRREPGHPQWHHGAFHDVRDSVRSDVRRMLHSRAEVPFQVPLEVNIVLIGFNKDGGYRYSVDPHQLEQLLKVSFPTHRPSCLETGEPLDIEHHIVYNAFPAGQPELIALEKAVKEAMVPAGKARETDFGREVPLFEVEAASVEPIFQMLYSYIFDTDSQENSVTESDKPAPNAIFILNFDKVRLDPRNKEINLDSLMYGRLPELTEEDIKEQEGDYIYRYHYNGGGSSQVWLGSGRFVVIDLSAGPCTYGKIETEEGSVSFRSLPRLKNVMRPRSMGTADQSSSDIFLGQLASLISTTVEYVIAPDVRFETVDLTSRLLIPIIVLQNHNRYNIMEQGHNYSINVEAIETEVKKMLHYGQEVVIIGGAHSLHRHEKLAIAVSKAMRGHSLQETKNDGRFHVHTKTYLDGALLKEEMEHSADVLAAGLLEVADPSLSSKFFLRQTWLDESEGSSDSILKHKPLWASYDSKRGKKRRKKVKKQGDLQPTYGTRVIPVFVLSLADVDPNLMMEDDSLVWTSNDVVIVLEHQNEKIPLSYVSETQRRHTLPSQAQRHILAGLASVVGGLSAPYEKASHVHERPVVNWLWATGCHPFGPFSNTSHISQMLHDVALRNTIYARVDYALHKIRETSETVQSFAAEYLKTPLGEPVKGKKEKSNTQLWLEKFYKKTTNLPEPFPHELVDRLEKYLDGLEEQLVDVSSLLYDHRLQDAFLNSSDILQSTRFTQQYVDHVLDSEGEKMRCCDIEYKYPAHSSQAYIYGGILIAGFFVYFVVIFFSSPVR 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01268 1265 ProSiteProfiles PPM-type phosphatase domain profile. 59 360 IPR001932 -
Bva05g01268 1265 CDD Ntn_hydrolase 499 551 - -
Bva05g01268 1265 Coils Coil 1166 1186 - -
Bva05g01268 1265 SUPERFAMILY PP2C-like 69 361 IPR036457 -
Bva05g01268 1265 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Bva05g01268 1265 PANTHER BNAC01G21930D PROTEIN 462 1263 - -
Bva05g01268 1265 PANTHER TRANSMEMBRANE PROTEIN-RELATED 462 1263 - -
Bva05g01268 1265 CDD PP2Cc 60 360 IPR001932 -
Bva05g01268 1265 Gene3D - 52 368 IPR036457 -
Bva05g01268 1265 SMART PP2C_4 46 358 IPR001932 -
Bva05g01268 1265 Pfam Protein phosphatase 2C 83 330 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01268 Bva-Chr5 6662905 6673338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01268 1 313 PP2C-type Phosphatase Gene Family AT3G17090 71.885 2.56e-151 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01268 - - gmx:100790294 1382.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01268 05 6662905 6673338 Bva05g01268 05 6662905 6673338 ECH