Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01266 ATGGATTCGGGTTCGCTTCCGATGGACGATTACGAGAGCTTGATTTCCACAACCGACGTTGAGCTTCTCAAGACAGCGTGGCGTAACGAGAAGGCGGCCCCTGAGATTCTTCGCTATGAGATCGATTTGATTCAGCGCATCAGAGGGCAGATCCAGCTGATGGAAGAAACTGTGGATGAGTTTTCAGCTGGTGGTACTGATCCCCTCACAGTATCACTTTATCAAATGGACTTGGATAGAACCCAGTTTCTATTACGATCATATCTCCGGATCCGCATTCAGAAGATTGAAAAATACATGTTCCACATCGCAAAAACTGATGAACTTTGGAACAGGCTAtctaaagaagagaaaactttTGCTAGAAGGAAAggcatttcttcttttaataATGATCTAAGTCAACATCTTGAGGAGAGTGTTCTGTCAAAGTTGCCTGAAAATTATCAGTCTATTCAGAAACAATCTGTAATTAGTGAAGAGGATGACATGGtCCCAGAACCACAACTAGAAACATTTGTCGTTTGTAGAAGTAAAGAGTATCTCACAGGGATCCAACTCGAGGATGGACCAGTCGATGACAGGTCGAAGCTCTTTGAGATGGAGCGTGGTGTCCTCTACTTTATATGTTACAAGTCAATTAAGGCACTTGTAGAGAGTGGGAAAATTGATCTGCTTTG 680 0.4118 MDSGSLPMDDYESLISTTDVELLKTAWRNEKAAPEILRYEIDLIQRIRGQIQLMEETVDEFSAGGTDPLTVSLYQMDLDRTQFLLRSYLRIRIQKIEKYMFHIAKTDELWNRLSKEEKTFARRKGISSFNNDLSQHLEESVLSKLPENYQSIQKQSVISEEDDMVPEPQLETFVVCRSKEYLTGIQLEDGPVDDRSKLFEMERGVLYFICYKSIKALVESGKIDLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01266 226 Pfam GINS complex protein 55 118 IPR021151 -
Bva05g01266 226 Gene3D - 7 216 - -
Bva05g01266 226 SUPERFAMILY GINS helical bundle-like 16 156 IPR036224 -
Bva05g01266 226 SUPERFAMILY PriA/YqbF domain 170 226 - -
Bva05g01266 226 CDD GINS_A_Sld5 19 142 IPR038749 -
Bva05g01266 226 PANTHER SLD5 PROTEIN 9 226 IPR008591 GO:0006261
Bva05g01266 226 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Bva05g01266 226 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 226 IPR031633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01266 Bva-Chr5 6656356 6659110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01266 10 164 Core DNA Replication Machinery Family AT5G49010 63.226 6.70e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01266 K10735 - gmx:100784291 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01266 05 6656356 6659110 Bva05g01266 05 6656356 6659110 ECH