Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01264 ATGGCATCATCTGTGATCTCAAATCCAGTAATGAACTCTGATCGATCacggaggaagaagaagaagaaagctcaGCCCAAGCACCAGCAAGAAGATcagaatcaaatcaaatggaaCTCCCAGGCTCAACAGCAAATCTACACCTCCAAACTCCAACAAGCCCTGGCTAGAGTCAACATCGGCTCTTCTAGTTCTGTCGCCAACAACGCGCCTCGCCGCGGCAAGGCCGTACGTGAAGCCGCCGATAGAGTTCTGGCTGTGACGGCCAAGGGAAGGACCCGATGGAGCAGAGCGATTTTAATGAACCGGCTTAAACTCAAGTTTCGGAAGCATAAGAGGCAGAGAGTTACGGCGGTCACCGGCACCGGTAGTACCCGATCGAAGAAACCGAGAGTGAGCGTTTACCGACTGAAGGGGAAGAATTTACCGGCTGTGCAGAGAAAAGTTAGGTTCCTTGGCCGGTTGGTTCCCGGTTGCCGGAAACAACCGTTTCCGGTGATTTTGGAGGAAGCCGTTGACTACATATCGGCGCTTGAGATGCAGGTTCGAGTCATGAGCGCCCTCACTGACTTACTCTCCGGCTCTAGTTCCGCGCCACCGTCTAGTTG 608 0.4984 MASSVISNPVMNSDRSRRKKKKKAQPKHQQEDQNQIKWNSQAQQQIYTSKLQQALARVNIGSSSSVANNAPRRGKAVREAADRVLAVTAKGRTRWSRAILMNRLKLKFRKHKRQRVTAVTGTGSTRSKKPRVSVYRLKGKNLPAVQRKVRFLGRLVPGCRKQPFPVILEEAVDYISALEMQVRVMSALTDLLSGSSSAPPSS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01264 202 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 12 198 - -
Bva05g01264 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 195 IPR036638 GO:0046983
Bva05g01264 202 CDD bHLH_AtIBH1_like 136 189 IPR044549 GO:0006355
Bva05g01264 202 MobiDBLite consensus disorder prediction 1 37 - -
Bva05g01264 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 198 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01264 Bva-Chr5 6641807 6643079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01264 37 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.127 5.62e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01264 - - gmx:100803765 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01264 05 6641807 6643079 Bva05g01264 05 6641807 6643079 ECH