Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01262 ATGGAGAAGAGAGAAGCAGAGAACAATTCCACCATTGAGATTGAGAATTCCATTTCCATGGCGACAACATTCTCCGACGAGATTCCGAGCACTAGCAGTTACCCTTTTACGAGCATCTTTGACATGTCATGTGATCAACCGGAAAAGCCTTCTTCTTTTGGCTTCACGGACTTGCTAGCTATCCAAGATTATACCCCTTCTTCATTCGATTGGCTTCCGGTCACCGCCACCATCACCACGACCTCTTCCATGCCAACCCACCACCCTCTTCCCTCGCCAGCGAGCTCCAATGTCCCCAACACCTCCGAGGTTTTGAACACTCCCACGTCCCCGAATACTAATTCTTCGATTTCCTCTTTGTCCAATGAATTGACAACCGCGACCAACATGGATGAGCAACAGagtaataatgataaatcACCAGGAAACGAAGAAGACGAAGATGGAGATGGAGACAGAGGAGATGACCCAGATCATGACAAGACTAAGAAACAGCTGAAACCCAAAAAGAAGAACCAGAAAAAGCAAAGGGAACCGAGATTTGCGTTCATGACAAAAAGTGAAGTTGATCATCTAGACGATGGGTATAGGTGGCGCAAGTACGGCCAAAAAGCTGTGAAGAACAGCCCTTATCCCAGGAGCTATTACCGTTGCACCACAGCGGGATGCGGCGTCAAGAAGAGGGTGGAGCGGTCCTCCGAGGACCCTTGTGTCGTTGTGACAACCTACGAGGGCCAACACAGCCACCCTTCTCCGGCGATGTCTCGGGCAAGCTACGGAGCATTCATGCAGCACGAATCTGCAGCTGGTGGGTTCGGACCCATGGGCGCCAGCGGCGGTGGTGGCGCTCTTGGCTGTCCACACTTTGTTGGAACCCAACAATTGCAAGTAGAATTACAATCGCAGCATCATCAAATTCAGCAGCAAGCGGCTTTGTTATATAGCGCGACCCCAGCTTTGacaaattatatgaatatgaattctTCGAGTTTTACGAGCTTTCTTCAAGACAACCAAGGATTTGGACCATCTTCTGTGTCGGCGGCTCAAGCTTTGTTGAGGGACAATGGGCTTCTTCAAGACATCGTGCCATCGCAAATTGGAAAGGAGGAGAAGGAGGATCATGATGACTA 1133 0.4854 MEKREAENNSTIEIENSISMATTFSDEIPSTSSYPFTSIFDMSCDQPEKPSSFGFTDLLAIQDYTPSSFDWLPVTATITTTSSMPTHHPLPSPASSNVPNTSEVLNTPTSPNTNSSISSLSNELTTATNMDEQQSNNDKSPGNEEDEDGDGDRGDDPDHDKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSEDPCVVVTTYEGQHSHPSPAMSRASYGAFMQHESAAGGFGPMGASGGGGALGCPHFVGTQQLQVELQSQHHQIQQQAALLYSATPALTNYMNMNSSSFTSFLQDNQGFGPSSVSAAQALLRDNGLLQDIVPSQIGKEEKEDHDD 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01262 377 Pfam WRKY DNA -binding domain 193 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01262 377 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 365 IPR044810 GO:0003700
Bva05g01262 377 SMART WRKY_cls 192 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01262 377 SUPERFAMILY WRKY DNA-binding domain 184 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g01262 377 ProSiteProfiles WRKY domain profile. 187 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01262 377 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 50 365 - -
Bva05g01262 377 Gene3D WRKY domain 176 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g01262 377 MobiDBLite consensus disorder prediction 82 137 - -
Bva05g01262 377 MobiDBLite consensus disorder prediction 82 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01262 Bva-Chr5 6615603 6617441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01262 162 371 WRKY Transcription Factor Family AT2G47260 53.521 5.71e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva05g01262 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01262 - - gsj:114394278 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01262 05 6615603 6617441 Bva05g01262 05 6615603 6617441 ECH