Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01243 ATGCAGAAGCAGATTTTCACCCCCCGATTCAGCAAGGGTGACCAGGTAGAGGTCTTCAAGCAAAAGACCAACTCATTTTATCCTGCTATTGTGCTCCGCGAACTGGTCAAGCCTAAGAACCTCGTCTTCGTCGAGTACCAAACCCTGTTTTCTTCATCGGAGGATGACTTGCCGGAACCATCAAAACTTCGCAGGGGGTTCACCAATGTGTCTAACGTGAGGCCCAAGGCTCCGCGGGATCTTATCCTATGCTACAAAATCGGCGATTGCGTAGAGGGATTTCGCGAAAATGCTTGGTGTCCCGGAACCATCAGGGAGATCCGCGAGAATTCCAAGTATTTGGTGGCGTTTGAcggtggaaagaaagaaattgctGAATTTGAGCAATGCAGCTTGCGGCGTCACCGAAAATGGGTTAATGGGTCTTGGGTGCCACCTATTTCTGAACAGGAGAAGCCACCTGATCTGGAGATGGAGACAAATCCTGGAGAGTCGAGgtttaaaatcaaatacagCAGGAAAATACGGGttgcaaaatttaagaaagGGATGGTGCTGGAAGTCACCAGTGATGAGGAAGGTTACCAGGGCGCTTGGTTTATTGCAACAATTGTTGACTCAATAGGAAATGACAGGTTTCTGGTGGAATATAGGGACCTGACAACAGATGATGGATCCCAGCTTTTAAAAGAAGAGGTAGATGCAAGGCATGTTAAGCCCTGTCCGCCACAAGTTCCATCAGTTGTTTCATTTAAACAGTTCCAAGAAGTTGATGCCTGGTATAATGATGGGTGGTGGGAGGGCATTGTTCTCAAAATATTAGACGGCAGAAAGTATTACGTTCATTTCATGCCTTCCAATGAGGtaatagaatttgaaatgtCAAAACTGAGGCCTCATCATAACTGGGTCAACGGAAAATGGGTCATGTCCTCTGAGAAGTCAATTCTGCTCACCGAGAAGCCTGGAGATGTAATGTTGCAGACCGAGGACACTGGAAAGAAACTAATCTTTAAATTAAAGGGGTCAAAGGAGCTGGCAAAAAAGAGGTCTGGAGATGTAATGTCAAAGACAAATGGCACTGGAAAGAAAGTAATCATTAAATTTGAGGGGTCAAATGAGCTGGCAAAGAAATCTAGAGATGTAATGTCAAAGACCAAGGACACTGGAAATGTATCTAGGGTACCTTTCTATAAAGGTACAAAGGTCGAAGTCAGAAGTGATGAAGAAGGTTACCAAGGTGCCTGGTATGCTGCTGTTATTGTTGATCTTATGCCGAATGGAAAGTACTTGGTGGAGTATGAGACCCTGAAAACGGATGATTTAACTGAACAACttaaagaagaagcagaagctTCAGATATCAGGCCATATCCACCGGAGACCAACCATCTTCACCCATATGCACAGTATGAAAAAGTTGATTCTTGGTATAATGATGGATGGTGGGTGGGTCAGGTAGTCAAGGTTCTTCGTGGCTTGAAGTACTTAGTTTACTTTTTGCCTACAAATGAGATGCTGGAATATGAACACTCTGATCTGAGGCCTCATCAAGAATGGATAGATGGAAAATGGATGATTCCTCCTTA 1589 0.4242 MQKQIFTPRFSKGDQVEVFKQKTNSFYPAIVLRELVKPKNLVFVEYQTLFSSSEDDLPEPSKLRRGFTNVSNVRPKAPRDLILCYKIGDCVEGFRENAWCPGTIREIRENSKYLVAFDGGKKEIAEFEQCSLRRHRKWVNGSWVPPISEQEKPPDLEMETNPGESRFKIKYSRKIRVAKFKKGMVLEVTSDEEGYQGAWFIATIVDSIGNDRFLVEYRDLTTDDGSQLLKEEVDARHVKPCPPQVPSVVSFKQFQEVDAWYNDGWWEGIVLKILDGRKYYVHFMPSNEVIEFEMSKLRPHHNWVNGKWVMSSEKSILLTEKPGDVMLQTEDTGKKLIFKLKGSKELAKKRSGDVMSKTNGTGKKVIIKFEGSNELAKKSRDVMSKTKDTGNVSRVPFYKGTKVEVRSDEEGYQGAWYAAVIVDLMPNGKYLVEYETLKTDDLTEQLKEEAEASDIRPYPPETNHLHPYAQYEKVDSWYNDGWWVGQVVKVLRGLKYLVYFLPTNEMLEYEHSDLRPHQEWIDGKWMIPP 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01243 529 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 6 235 - -
Bva05g01243 529 SMART agenet_At_2 178 246 IPR014002 -
Bva05g01243 529 SMART agenet_At_2 395 463 IPR014002 -
Bva05g01243 529 SMART agenet_At_2 249 305 IPR014002 -
Bva05g01243 529 SMART agenet_At_2 83 140 IPR014002 -
Bva05g01243 529 SMART agenet_At_2 466 522 IPR014002 -
Bva05g01243 529 SMART agenet_At_2 8 81 IPR014002 -
Bva05g01243 529 Gene3D - 388 465 - -
Bva05g01243 529 Pfam Agenet domain 400 460 IPR008395 -
Bva05g01243 529 Pfam Agenet domain 186 243 IPR008395 -
Bva05g01243 529 Pfam Agenet domain 13 76 IPR008395 -
Bva05g01243 529 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 102 528 - -
Bva05g01243 529 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 235 - -
Bva05g01243 529 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 102 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01243 Bva-Chr5 6525274 6531765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01243 406 520 PHD Transcription Factor Family AT5G58610 26.667 8.38e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01243 - - adu:107483399 490.73