Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01216 ATGGAGTTGCAGTTAACTCCAAGAGGGAGAAACCGTGAGGTAACTTTCCAGCATCAGAATCAGTTAAGCTTTGAAAGAGGTGGGGATTCTGTTGTGGaggaagatagggaatttcAGAAGCAATGGGCTGCAATAGAGAAACTACCCACTTTTAAAAGGATTAGAACTTCGTATTTGGAAGCCACGGATGACCTTGCAAGCAGCAGCGAAAGAGAATTgggaagcagaagcagaagagaaTGGGGAAGCAGAAGCAAAAGAGGCAGCAGAAGAGAACCAgcaagcagaagcagaagagaaagagaattagGTAAAAGCGTGGTTAATGTCGCCAAGCTTGAAGCATTTGAAAGGCATCAGTTAATTGACAAGCTCATAAAGCATAATGAGATTGATAACCTCCAATTACTGAAGAAGCTAAGAGAAAGGATAGACAGAGTAAATGTGAAATTACCTACGGTGGAGGTCAGGTACAAGAACCTGCATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAACCACTCCCTACTCTGTGGAATTCACTTGTTAGCTTCTTTTCAGGTTTTAAAAAGGTGATATGGTGTAATCCTCAAGAAGCCAAGATTAGCATTCTAAAAGATGTCAGTGGCGTCATAAAGCCATCAAGGCTTACTCTTCTACTTGGTCCACCCGGCTCTGGAAAAACAACCTTGTTACTGGCACTGGCTGGAAAATTAGAGGAACCTCTCAAGGTGTCTGGGGAAATTTCTTACAATGATCACAATCTAGATGAGTTTGTTCCTCAGAAAACATCAGCTTACATAAGCCAATATGACCTGCATGTACCTGAGATGACAGTGAGGGAAACAATCGACTTTTCAGCACGCTGCCTGGGCGTTGGAAGTCGAGTTGATCTGATAACTGAAGTCAtcaggagagagaaagaagcagGAATCGTCCCTGACCCAGATATTGACATGTATATGAAGGCAATTTCAATTGAAGGGCAAAGTGAAAATCTACAAACAGATTATGTTCTGAAGATTCTTGGACTGGATATCTGCGCTGATATAATGGTTGGTGATGCATTAACAGTTGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTTGGTCCcataaaatctctttttatgGATGAAATATCAACTGGCTTGGACAGCTCCACAACGTTTCAGATAATCACCTATCTCCAGCAATTGGCACACATCACAGATACAACTGCAGTGGTTTCCCTTCTTCAGCCAGCACCTGAAACCTTTGAACTATTTGATGATCTAGTATTGATGGCAGAGGGAAAAATAGTATACCATGGGCCCCGCAGTCAAGCACTCCAATTTTTTGAGGAGTGTGGTTTCAAGTGCCCAGAAAGAAAAGGGGTGGCAGACTATCTACAGGAGGTAATCTCCAAGAAAGATCAAGGGCAATATTGGTATCGCACAGATACTCCTTACAGTTACATTTCAGTGGATCAGTTATCTCAAATGTTCAAAGCAAGTTACTGGGGACAAATGTTAAATGCCGAGCTCACACAACCATATGATGAATCTCAATCCCATGAGGATGCTTTATCATTTAGCAAGTACTCCTTGAGCAAATGGGAGTTATTGAAAGCTTGCACGACAAGGGAGCTGCTTCTCATGAAGCGAAACTGGTTTATCTATGTATTCAAAACCGCACAGCTTATAATCACTGCATTCATAACAATGACAGTATTTCTACGTACTGAGATGGATGTGGACTTGATGGGTTCAAGCTATTTTTTGGGCTCTCTGTACTATACCCTCGTCCGCCTCATGACTAATGGCATTGCTGAGCTTATCATGACTATTACTAGACTTCCTATATTTCACAAGCAGAAGGCTTTCTATCTTTATCCAGCATGGGCTTACTGTATTCCAGCTGCCATTCTTAAGATTCCATTTTCAGTCACCGATTCTATTGTCTGGACATCCATAACTTATTATGTCATAGGCTATAGCCCTGAAGTATCAAGGTTCTTCCGCCAGATTCTATTGCTTGTCACTCTACATATGTCTTCAACTTCGATGTGTCGTTGCCTTGCTGCAGTTTTCCAAACTGAAGTTATGGCTACAACTATTGGCTCTTTTGTCTTAGTGCTGATGTTCTTGTTTGGAGGCTTCATTATTCCTAAACCATCATTACCATCATGGTTAAGGTGGGGTTTCTGGCTTTCTCCAATGTCATATGGGGAAATAGGAATCACACAAAATGAGTTTCTTGCTCCCCGCTGGCAGAAGGTCCAAGAGGGAAACGTCACCTTAGGGAAGACAGTTCTAAGTAGTCGTGGTTTAGACTTTCATGGCAACTTCTATTGGCTCTCAGTTGGCGCACTGCTTGGTTTTGCAATCCTTTTTGATTTTGGATTTATCATTGCCTTAAGTTACTTAAAACCTCCAAAGATGTCTCGAGCATTTGTTTCAAAAAAGAGGCTTTCTGAACTAAAGGGAGGAGAAAATTCCAAGAACATTCAACTAGAAAATAGATCAGTCGCAGTTGACATTAGTCAGACTACTAAGGAAACAGGTCAACAAGGGAAAATGGTCTTGCCCTTTGAGCCACTGACAATATCATTTAAGGATGTCCGGTATTTTGTTGAGATCCCCCCGGAGATGAGAGGTCATGGATCCAATGAGAAAAAACTTCAATTGCTCTGTGATGTCACTGGCGCATTTAGGCCAGGCATTCTTACAGCACTTATGGGAGTCAGTGGAGCAGGGAAGACAACTCTCATGGATGTTCTTTCAGGTAGAAAAACTGGAGGGACCATTGAAGGAGATATAAGAATAGGAGGATATCCCAAAGTGCAGAAAACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCTCCATATATAACTGTTGAAGAATCTGTGACATACTCAGCTTGGTTGCGGCTGCCAATGGAGATTGATTCAGTCACAAAAGCGAAATTTGTAAAAGAAGTGATTGAAACAATCGAACTTGATGATATTAAAGACTGCTTAGTTGGCATTCCTGGCCAAAGTGGCTTATCAACCGAACAACGTAAAAGACTAACCATTGCAGTGGAGCTGGTTTCGAATCCATCAATAATCTTTATGGATGAACCCACGTCAGGTTTAGACGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTAAAGAATGTAGTTGCCACTGGCAGGACCACGGTTTGCACCATACACCAACCAagcattttcatatttgaaacATTTGATGAGTTGATTCTAATGAAATCGGGAGGACGGATTATTTATAATGGAATGTTAGGCCACCATTCAAGTAAACTGATCGAATATTTTCAGAGTATACCTGGTGTTCCGAACATCAATGACAACTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTCCATCTGTAGAAGCAGATCTTCATGTAAATTTTGCAGATATCTATAAAGAGTCACCTCTTTACCGGGATACCCTTGAATTGGTAGAACAGTTAAGTGAACCATTGCCGGGTACAAAAGACTTAAAATTTTCCAGTCGTTTCCCACAAAATAGCTTTGGGCAGTTTATGGCATGCCTATGGAAGCAACACCTGTCCTATTGGAGAAGCCCTGAGTACAACATAACACGTTTTGCGTTCATGATTGTTGCGTCAGCGTTATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATacaCACTCAGCAGGATTTGTTCAACATCCTCGGATCAATGTATATTGCTGTTATATTCTTGGGCATAAATAACTGTTCATCGGTTCTACCATATGTGGCAACTGAACGGTCTGTCTTATACCGTGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTATGCCTTCGCACAGgTGGCAATTGAGATACCATATATCTTGGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTACAATTGGTCAGTTGCAAAGGTGTTTTGGTACTTCTACACTACATTCTGTACATTCTTGTACTTTGTATATCTTGGGATGCTGTTGATTTCATTGTGCGCCAATATCGATTTAGCTTCGGTACTGTCAGCTTCAGTGTATACCATATTCAATCTTTTCTCTGGATACCTTATGCCAGGGCCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGCTTTGTCCCACATCTTGGTCCCTAAACGGGCTGCTAACTTCACAGTATGGAGACATTGAGGAAGAAATAGTCATATATGGTGAGAAGAAATCAGTTGCTTCCTTTCTAGAAGATTATTATGGGTTCCATCATAATCGACTAAGCATTACGGCTGTGGTGCTCATTGTTTTCCCAATCGTATATGCATCTCTCTTTGCCTATTGCATAGGGAAATTGAACTACCAAAAGAGGTA 4409 0.4035 MELQLTPRGRNREVTFQHQNQLSFERGGDSVVEEDREFQKQWAAIEKLPTFKRIRTSYLEATDDLASSSERELGSRSRREWGSRSKRGSRREPASRSRRERELGKSVVNVAKLEAFERHQLIDKLIKHNEIDNLQLLKKLRERIDRVNVKLPTVEVRYKNLHVEAECEVVQGKPLPTLWNSLVSFFSGFKKVIWCNPQEAKISILKDVSGVIKPSRLTLLLGPPGSGKTTLLLALAGKLEEPLKVSGEISYNDHNLDEFVPQKTSAYISQYDLHVPEMTVRETIDFSARCLGVGSRVDLITEVIRREKEAGIVPDPDIDMYMKAISIEGQSENLQTDYVLKILGLDICADIMVGDALTVGISGGQKKRLTTGEMIVGPIKSLFMDEISTGLDSSTTFQIITYLQQLAHITDTTAVVSLLQPAPETFELFDDLVLMAEGKIVYHGPRSQALQFFEECGFKCPERKGVADYLQEVISKKDQGQYWYRTDTPYSYISVDQLSQMFKASYWGQMLNAELTQPYDESQSHEDALSFSKYSLSKWELLKACTTRELLLMKRNWFIYVFKTAQLIITAFITMTVFLRTEMDVDLMGSSYFLGSLYYTLVRLMTNGIAELIMTITRLPIFHKQKAFYLYPAWAYCIPAAILKIPFSVTDSIVWTSITYYVIGYSPEVSRFFRQILLLVTLHMSSTSMCRCLAAVFQTEVMATTIGSFVLVLMFLFGGFIIPKPSLPSWLRWGFWLSPMSYGEIGITQNEFLAPRWQKVQEGNVTLGKTVLSSRGLDFHGNFYWLSVGALLGFAILFDFGFIIALSYLKPPKMSRAFVSKKRLSELKGGENSKNIQLENRSVAVDISQTTKETGQQGKMVLPFEPLTISFKDVRYFVEIPPEMRGHGSNEKKLQLLCDVTGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGTIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVTYSAWLRLPMEIDSVTKAKFVKEVIETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIFIFETFDELILMKSGGRIIYNGMLGHHSSKLIEYFQSIPGVPNINDNYNPATWMLEATSPSVEADLHVNFADIYKESPLYRDTLELVEQLSEPLPGTKDLKFSSRFPQNSFGQFMACLWKQHLSYWRSPEYNITRFAFMIVASALFGAVFWQKGKEIHTQQDLFNILGSMYIAVIFLGINNCSSVLPYVATERSVLYREKFAGMYSSMAYAFAQVAIEIPYILVQAILYVAITYPMIGYNWSVAKVFWYFYTTFCTFLYFVYLGMLLISLCANIDLASVLSASVYTIFNLFSGYLMPGPKIPKWWVWCYWLCPTSWSLNGLLTSQYGDIEEEIVIYGEKKSVASFLEDYYGFHHNRLSITAVVLIVFPIVYASLFAYCIGKLNYQKR 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01216 1469 Pfam Plant PDR ABC transporter associated 757 819 IPR013581 -
Bva05g01216 1469 Pfam ABC-transporter N-terminal 94 180 IPR029481 -
Bva05g01216 1469 Pfam ABC-2 type transporter 420 474 IPR043926 GO:0140359
Bva05g01216 1469 Pfam ABC-2 type transporter 1078 1139 IPR043926 GO:0140359
Bva05g01216 1469 MobiDBLite consensus disorder prediction 65 101 - -
Bva05g01216 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 893 1104 IPR027417 -
Bva05g01216 1469 Pfam ABC-2 type transporter 1195 1407 IPR013525 GO:0016020|GO:0140359
Bva05g01216 1469 Pfam ABC-2 type transporter 541 752 IPR013525 GO:0016020|GO:0140359
Bva05g01216 1469 Pfam ABC transporter 205 386 IPR003439 GO:0005524
Bva05g01216 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 183 462 IPR003439 GO:0005524
Bva05g01216 1469 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 17 1469 - -
Bva05g01216 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 461 IPR027417 -
Bva05g01216 1469 Pfam ABC transporter 899 1049 IPR003439 GO:0005524
Bva05g01216 1469 CDD ABCG_PDR_domain2 866 1104 IPR034003 -
Bva05g01216 1469 SMART AAA_5 214 446 IPR003593 -
Bva05g01216 1469 SMART AAA_5 906 1098 IPR003593 -
Bva05g01216 1469 MobiDBLite consensus disorder prediction 1 21 - -
Bva05g01216 1469 CDD ABCG_PDR_domain1 201 444 IPR034001 -
Bva05g01216 1469 Gene3D - 190 490 IPR027417 -
Bva05g01216 1469 Gene3D - 883 1116 IPR027417 -
Bva05g01216 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 869 1121 IPR003439 GO:0005524
Bva05g01216 1469 PANTHER ATP-BINDING CASSETTE TRANSPORTER 17 1469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01216 Bva-Chr5 6333692 6342832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01216 894 1081 Calmodulin-binding Proteins AT2G36910 27.404 1.74e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01216 K08711 - gmx:100779615 2294.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01216 05 6333692 6342832 Bva05g01216 05 6333692 6342832 ECH