Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01212 ATGGGTTGCTTTGGATTTTGCAAAGAAAGCGATGTTTATACATCTACTGACAAGGGACCTTCCAGGCCAGTCTATCCTTCGGAGAACAGTGGTTACAACGGAAATCAAGCTGCACAAATCCGTGCTCGTACTATAAATTTTCAACCCATAGTTATACCATCGATTTCAGTAGATGAACTAAAGGCTCTGGCTGATAATTTTGGCTCAAAATCCTTCATCGGTGAAGGTGCATATGGCAAAGTATATTTTGCTGAAATGAAAGATGGACGTGCTGTGGCAATCAAAAAGTTAGATTCCAGTACGCAACAACCTGAACGGGAATTTCTTGCTCAGgtcTCCATAGTATCAAGGCTAAAGGATGAACATGTTGTAGAGCTTGTTGGTTATTGTGTTGATGGTCCTCTCCGTGCCCTTGCCTATGAGTATGCTCCTAAGGGATCCCTTCATGATATTCTACATGGACGTAAAGGTGTCAAAAGAGCAAATCCTGGTCCTGTATTGTCATGGGCACAGAGAGTTAAAATTGCTGTTGGGGCAGCTAGAGGACTTGAATATCTGCATGAAAAAGCAGAACCTCGGATTATTCACCGTTATATCAAATCTAGCAACATACTACTCTTTGACGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAGATCAAGCACCTGATGCAGCAGCACGTCTTCATTCTACTCGTGTTCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAGTTCACGGCAAAAAGTGATATTTACAGTTTTGGAGTTATACTGTTAGAACTCTTAACTGGCCGCAAGCCTGTTGATCATACACTGCCACGAGGGCAGCAGAGTCTTGTCACCTGGGCAACACCAAGACTTAGTGAAGATAAGGTGAAGCAATGTATGGATGGAAGACTAATGGGAAACTACCCTCCAAAGGCAGTTGCAAAGATGGCTGCTGTTACTGCAATGTGCGTGCAATATGAAGCTCAGTTTCGGCCTAATATGAGCATTGTAGTCAACGCTCTGCAACCTCTGCTCAATCCTCGTTCTCATCACCCAATGGAAGCACCCAACCTATA 1085 0.4304 MGCFGFCKESDVYTSTDKGPSRPVYPSENSGYNGNQAAQIRARTINFQPIVIPSISVDELKALADNFGSKSFIGEGAYGKVYFAEMKDGRAVAIKKLDSSTQQPEREFLAQVSIVSRLKDEHVVELVGYCVDGPLRALAYEYAPKGSLHDILHGRKGVKRANPGPVLSWAQRVKIAVGAARGLEYLHEKAEPRIIHRYIKSSNILLFDDDVAKIADFDLSDQAPDAAARLHSTRVLGTFGYHAPEYAMTGQFTAKSDIYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCMDGRLMGNYPPKAVAKMAAVTAMCVQYEAQFRPNMSIVVNALQPLLNPRSHHPMEAPNL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01212 361 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Bva05g01212 361 Pfam Protein tyrosine and serine/threonine kinase 72 344 IPR001245 GO:0004672|GO:0006468
Bva05g01212 361 MobiDBLite consensus disorder prediction 14 31 - -
Bva05g01212 361 ProSiteProfiles Protein kinase domain profile. 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01212 361 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Bva05g01212 361 CDD STKc_IRAK 73 347 - -
Bva05g01212 361 Gene3D Phosphorylase Kinase; domain 1 30 142 - -
Bva05g01212 361 MobiDBLite consensus disorder prediction 12 31 - -
Bva05g01212 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Bva05g01212 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Bva05g01212 361 Gene3D Transferase(Phosphotransferase) domain 1 144 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01212 Bva-Chr5 6301258 6304257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01212 55 345 Receptor kinase-like Gene Family AT4G02010 49.320 6.51e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bva05g01212 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01212 K13436 - gmx:547596 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01212 05 6301258 6304257 Bva05g01212 05 6301258 6304257 ECH