Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01211 ATGACATCTGGTCTGGATTCAGGGCTGTCCAAGCAAACAACCGTTTTTGGTCTGAAAGTCTGGGAATTAATGGGAATAACGGTTGGATTGTTCATTGTAATCATTCTAGTTGTGCTGTCAATATGCCTTACATCACgaaagaaatcaagaaaagTCAACAGCACGCTTCCCGTTAGCCATGTGTTATCGGTTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCAGCTAATAACCGTCCACAGAATGGTGCTTTTATGAGCCTGTATGACAAATTTAATGACAAAGATTCAGAAAAAGTTTTGATCCAAACAAAGAATGGGGAAAATAGTAGTCAATCAGGCTCATTTGTTCATGTAGAGAAAGATGGTCCTGGCTCTCAATCAGGTGAAGAAAGTGGCGCAGGGACCATCTCTTCTTACAGACCTTCTTCGCATCCTGTAACTATGGCATCCCCTTTGTCTGGCCTACCCGAATTCTCTCACCTTGGCTGGGGGCACTGGTTTACACTGAGGGACCTTGAACTTGCAACCAACAGGTTTtctaaagaaaatgttattggTGAAGGTGGATATGGAGTTGTTTATAGAGGTGAGCTAATTAATGGGAGTCCTGTTGCCATCAAGAAGCTCCTCAATAATTTGGGACAAGCTGAGAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTCTGGGTTACTGCATTGAAGGCACTCACAGGTTATTGGTTTATGAATATGTTAATAATGGCAATCTAGAGCAGTGGCTTCATGGAGCCATGCGTCAGTATGGTTATCTTACTTGGGACGCTCGCATGAAAGTTCTCCTTGGCACAGCAAAAGGACTGGCTTATTTGCATGAGGCAATTGAACCAAAGGTTGTGCATCGAGACATTAAGTCAAGCAACATTCTAATTGATGACAAATTCAATGCAAAAATATCTGACTTTGGGCTGGCTAAGTTACTGGGTTCTGGAAAGAGTCATATCACAACTAGAGTAATGGGAACTTTTGGATATGTGGCGCCAGAATATGCCAATTCAGGTTTACTTAATGAGAAAagtgatgtttatagttttggagtaTTGCTCCTAGAAGCAATTACTGGGAGAGACCCGGTGGATTATGGGCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTCGGGAGTAGGCGTTCAGAAGAGGCGGTGGATCCAAACATTGAGACAAGACCATCTACAAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCATATGCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAAGAATATCCCATACCGCGAGAGGATCGAAGACGGCGAAGGAGTCAAGCAAGCAACTTGGAGGGAGAGGCCCTGAGAGAGAAGGAGACTTCTGATACAGACAAGAGTGACAATCCAGATTATAGGTCCAATGACAAAAGGAACCAAAGGAAATA 1520 0.4217 MTSGLDSGLSKQTTVFGLKVWELMGITVGLFIVIILVVLSICLTSRKKSRKVNSTLPVSHVLSVSEEIKEIRVDQVSANNRPQNGAFMSLYDKFNDKDSEKVLIQTKNGENSSQSGSFVHVEKDGPGSQSGEESGAGTISSYRPSSHPVTMASPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGELINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDKFNAKISDFGLAKLLGSGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPAAEVNLVDWLKMMVGSRRSEEAVDPNIETRPSTSALKRALLTALRCVDPYAEKRPKMSQVVRMLESEEYPIPREDRRRRRSQASNLEGEALREKETSDTDKSDNPDYRSNDKRNQRK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01211 506 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01211 506 PANTHER RECEPTOR-LIKE KINASE PLANT 2 506 - -
Bva05g01211 506 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Bva05g01211 506 MobiDBLite consensus disorder prediction 131 148 - -
Bva05g01211 506 PANTHER OS01G0323000 PROTEIN 2 506 - -
Bva05g01211 506 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
Bva05g01211 506 MobiDBLite consensus disorder prediction 106 148 - -
Bva05g01211 506 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Bva05g01211 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Bva05g01211 506 SUPERFAMILY Protein kinase-like (PK-like) 166 461 IPR011009 -
Bva05g01211 506 CDD STKc_IRAK 188 454 - -
Bva05g01211 506 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01211 506 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01211 506 MobiDBLite consensus disorder prediction 457 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01211 Bva-Chr5 6296883 6300878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01211 159 456 Trihelix Transcription Factor Family AT1G70460 50.495 2.65e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bva05g01211 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01211 - - gmx:100793499 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01211 05 6296883 6300878 Bva06g00400 06 5078969 5082682 BWGD
Bva05g01211 05 6296883 6300878 Bva05g01211 05 6296883 6300878 ECH