Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01201 ATGCATCCAAAACTTGATGATGAGGAAGAAAGTTATTCCTACGCCATACACCTAGCGAGGTCAATAGCACTTCCCATGGTCTTGAAAACAGCCATTGACCTCAAGGTGTTTGATATAATTGCTGAATCAGGTCCCGATGCAAAGCTCTCTGCAATTGACATTGCTGCCCAGATTACTAATAAGAACCCAGAAGCAGCCTCAATGTTAGACCGTATCCTCAGGCTCCTAGCCTCTCACTCTGTGCTTCATTGCTCTCTTGTTGAAGATCAACACAAGCTTGGTTCTTTTCAGAGACTTTACAGCCTAAATTCTGTGTCGAAACATTTCGTACCTGACGATCATGGGATGTCATTGGGGAACTTCATGCCCATCACTCATGACAAGGTCTTCTTAGAGAGCTGGGCCCATTTGAAAGAGGCAATTGTAGAAGGTGGTATTGCATTCAACAGAGCTCATGGTTGCAACGCCTTTGAGTACCAAGGCTTGGATGCCAGGTTTAATGAAGTTTTTAACACCGCAATGATCAACAATACCACTATAGTTATGAAGAAGATTCTTGAAGTCTATAATGGTTTTGAGAGTATCAATACACTGGTTGATGTTGGTGGAGGTCTTGGGATCACCCTTAACTTGATCATTTCCAAATACCATCATATTCGTGGcatcaattttgatttatctCATGTTGTACAACATGCTCCTTCTTATCCTGGTGTGGAGCATGTGGAAGGAGACATGTTTGAGAGTGTGCCTAAAGGAGATGCCATATTCATGAAGTGGATACTTCATGATTGGAGTGATGAAATGTGCTTGAAAGTGTTGAAGAATTGTTATGACGCTATTCCTCAAGATGGAAAGGTGATTGTTGTGGAGGCAGTTATTCCTCTTTTACCAGAGACCAGTGCTGCTGCCAAGGGCATATCCCTACTCGACGTTCAAATGATGACCCAAAATCCAGGTGGGAAGGAGCGAACCGAACAAGAGTTCATGGACTTGGCAACTGCAGCAGGATTTAGTGGCATTAAATATGAATGCTATGTCAATAACTTATGGGTTATGGAGTTGttcaaata 1073 0.4194 MHPKLDDEEESYSYAIHLARSIALPMVLKTAIDLKVFDIIAESGPDAKLSAIDIAAQITNKNPEAASMLDRILRLLASHSVLHCSLVEDQHKLGSFQRLYSLNSVSKHFVPDDHGMSLGNFMPITHDKVFLESWAHLKEAIVEGGIAFNRAHGCNAFEYQGLDARFNEVFNTAMINNTTIVMKKILEVYNGFESINTLVDVGGGLGITLNLIISKYHHIRGINFDLSHVVQHAPSYPGVEHVEGDMFESVPKGDAIFMKWILHDWSDEMCLKVLKNCYDAIPQDGKVIVVEAVIPLLPETSAAAKGISLLDVQMMTQNPGGKERTEQEFMDLATAAGFSGIKYECYVNNLWVMELFK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01201 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Bva05g01201 357 Gene3D - 1 109 IPR036388 -
Bva05g01201 357 PANTHER O-METHYLTRANSFERASE 8 357 IPR016461 GO:0008168
Bva05g01201 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 354 IPR029063 -
Bva05g01201 357 Pfam O-methyltransferase domain 134 339 IPR001077 GO:0008171
Bva05g01201 357 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 357 - -
Bva05g01201 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 357 IPR016461 GO:0008168
Bva05g01201 357 Pfam Dimerisation domain 26 77 IPR012967 GO:0046983
Bva05g01201 357 Gene3D Vaccinia Virus protein VP39 111 357 IPR029063 -
Bva05g01201 357 SUPERFAMILY "Winged helix" DNA-binding domain 7 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01201 Bva-Chr5 6240682 6242451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01201 8 357 Monolignol Biosynthesis Gene Families AT5G54160 52.841 5.98e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01201 K13066 - tcc:18589884 482.641