Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01195 ATGGAAGAGAAAGTTGCAGTAAAGAAATTCCTGGAAGTTGAAGAAAAGCCACCAGTAAGCGCATATGATAATATGATAGAAGATGCACCATACAGGACTGATAAGctTGGATCCAATCTTCTGAGTTTGAACCTGAATAATTCTGATGAACAGCTTCATGAAATTCAAGAGCAGCCCTTGAACCAAGTGGGATTGCTGAGAATCAAGCTAGAGGAAGCGAAACAAGAGAATCAGAATCTAAGATCTTTGCTAAGTCAGATATCTAAAAGCTATACTTCTCTTCAGAATCACTTGCACTTGGAGGTgaagaagcagcagcagcagcaattATCGGACCTGCAGGAGGATAAAAGACAAGATGAAATGGAGAAGCAAGCATTACCCACAAGGCAGTTCCTGGATGTCAGTAGTGACCCTTCACCTTCCCATGGAAACAATGGGGAAGGAATGGGCTCTCCAGAAAAGAGTGGGAAACGCACAGGCACAGAACTTGCATTTGGACACAATGTTACAGGtgatgattttataaataaccaaataagACCAGAAGGTGGAAAATCCATAGAAGATGCTCAAGCGTCTGAGGCATCTTGCAGGAAAGCTAGAGTGTCCATAAGGGCAAGAtcagatttttctttgATGGGTGATGGATGTCAATGGAGAAAATATGGACAAAAGATAGCCAAGGGCAACCCTTGTCCCCGGGCTTACTACCGTTGTAGCATGGGAACTGCATGTCCTGTTCGTAAGCAGGTGCAACGGTGTGCTAAGGATGAGACTGTTCTGATTACAACCTACGAAGGAAAGCATAACCATCCACTGCCACCAGCAGCCACAGCTCTGGCAAGCACAACATCAGCAGCACTGAGCATGTTCCTTTCAGGATCAACTACAAGTCAACATGGCAACACAGCACTGTCAAACCATTCAGGCCTCTTCTCTTCATTATCTACTTCTGCCTCCACCAACCTGGCAACCTTCTCTCCATCTGCATCATGTCCCACAATAACACTGGACTTAACCCAGCCCAACCCTGACAACGTTCTGCAGTTCCAAAGAGCTACCTCATTGAACCTCAGCCAGTCATTCCCTTTGCCATTGCTTGGCTGCACTCAGCAATCTCAGGGCTTTTACTTGTCTTCTAAGCTTCCAGCAACCACGGTGCCCTTAGGGAAAGACCCTTTGGTGGAAATGGTCAGTGCAGCAATAGTAAAAGATCCTTCTTTCAAGGCTGCATTAGCTTCTGCCATTTCATCTTTCACTGCACCCTCTCaaaacattaataatta 1289 0.4313 MEEKVAVKKFLEVEEKPPVSAYDNMIEDAPYRTDKLGSNLLSLNLNNSDEQLHEIQEQPLNQVGLLRIKLEEAKQENQNLRSLLSQISKSYTSLQNHLHLEVKKQQQQQLSDLQEDKRQDEMEKQALPTRQFLDVSSDPSPSHGNNGEGMGSPEKSGKRTGTELAFGHNVTGDDFINNQIRPEGGKSIEDAQASEASCRKARVSIRARSDFSLMGDGCQWRKYGQKIAKGNPCPRAYYRCSMGTACPVRKQVQRCAKDETVLITTYEGKHNHPLPPAATALASTTSAALSMFLSGSTTSQHGNTALSNHSGLFSSLSTSASTNLATFSPSASCPTITLDLTQPNPDNVLQFQRATSLNLSQSFPLPLLGCTQQSQGFYLSSKLPATTVPLGKDPLVEMVSAAIVKDPSFKAALASAISSFTAPSQNINN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01195 429 MobiDBLite consensus disorder prediction 102 177 - -
Bva05g01195 429 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01195 429 MobiDBLite consensus disorder prediction 110 127 - -
Bva05g01195 429 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 429 - -
Bva05g01195 429 SUPERFAMILY WRKY DNA-binding domain 207 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g01195 429 Pfam WRKY DNA -binding domain 216 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01195 429 Gene3D WRKY domain 198 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva05g01195 429 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 429 IPR044810 GO:0003700
Bva05g01195 429 MobiDBLite consensus disorder prediction 130 149 - -
Bva05g01195 429 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva05g01195 429 Coils Coil 63 90 - -
Bva05g01195 429 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01195 Bva-Chr5 6200726 6204385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01195 66 420 WRKY Transcription Factor Family AT4G04450 41.519 2.55e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva05g01195 WRKY 5.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01195 - - gmx:100797109 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01195 05 6200726 6204385 Bva08g01450 08 7591589 7595149 BWGD
Bva06g00436 06 5226132 5228749 Bva05g01195 05 6200726 6204385 BWGD