Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01187 atgtctcTGCCAACGCCGACAGAGCTTCAGATCAAGGAAGCTGTAGGCGTGGCACCcacctcttcctcttcttcataCAAAAACCACACCAATTCTTTCTCTCCTTTGCCTCTTCCCAAGACAAGCAAGCATGAAGACAGCGATGAAGATCTGTTCACGGTTCCAGACATGGAATCTACACCGAGTGTCCATTCTGCAAGTGCTCTTCCTAATAGCAACCTTGACCAAAGTAACAATGTCACAGACACTACTCAATTTCAAGCTGCTTTTCCTGGAAAGCGCCGAAGGGGAAGAAACCCTGTTGATAAGGAGTACAGACGCCACAAGAGGTTGTTGAGGAATAGAGTCTCTGCTCAACaagcaagagaaagaaagaaggtatATGTGAATGACCTGGAATCAAGAGCTAGTGAGTTGCAGGACAAGAATTCCAAGTTAGAAGACCGCATCTCCACTTTAATGAACGAGAACGCCATGCTCCGGAAGGTTCTAATGAACACGAGACCAAAACCTGATGAGAGTATCGAACCAAAGCAGGATCAGTCAAGTAAATGCTA 557 0.4219 MSLPTPTELQIKEAVGVAPTSSSSSYKNHTNSFSPLPLPKTSKHEDSDEDLFTVPDMESTPSVHSASALPNSNLDQSNNVTDTTQFQAAFPGKRRRGRNPVDKEYRRHKRLLRNRVSAQQARERKKVYVNDLESRASELQDKNSKLEDRISTLMNENAMLRKVLMNTRPKPDESIEPKQDQSSKC 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01187 185 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 167 IPR004827 GO:0003700|GO:0006355
Bva05g01187 185 Pfam bZIP transcription factor 103 162 IPR004827 GO:0003700|GO:0006355
Bva05g01187 185 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 19 184 IPR044280 GO:0000981|GO:0045944
Bva05g01187 185 MobiDBLite consensus disorder prediction 58 88 - -
Bva05g01187 185 MobiDBLite consensus disorder prediction 165 185 - -
Bva05g01187 185 MobiDBLite consensus disorder prediction 1 105 - -
Bva05g01187 185 Coils Coil 122 163 - -
Bva05g01187 185 MobiDBLite consensus disorder prediction 16 38 - -
Bva05g01187 185 CDD bZIP_HY5-like 107 158 - -
Bva05g01187 185 Gene3D Single helix bin 125 166 - -
Bva05g01187 185 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 109 124 IPR004827 GO:0003700|GO:0006355
Bva05g01187 185 SUPERFAMILY Leucine zipper domain 105 165 IPR046347 GO:0003700|GO:0006355
Bva05g01187 185 SMART brlzneu 102 166 IPR004827 GO:0003700|GO:0006355
Bva05g01187 185 MobiDBLite consensus disorder prediction 166 185 - -
Bva05g01187 185 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 19 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01187 Bva-Chr5 6157839 6160563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01187 59 174 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 63.025 1.57e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva05g01187 bZIP_1 2.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01187 K16241 - gmx:778143 234.572