Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01183 atggaagaaaaaattgaagccaGAGTTGTGAAGACCGAGGcagagaaatttgaagaagaaggagagaaagaacaaaacttGGCTCCAGAATCTTCTCCTGTGCCTGCAAATCTTGGTGATAATGTTGATTGGGTCAACAACAGCAGTGAAAAACCTCGGAAAATGGTTTCTGTGGGAGAAGGGAAAGAGACAGTTGACGAATCAGCTGGGAACAACTTGGGTGATGTGTCAAACGCACATTTCTCAGCAAACAGGCCATTGCCAACATCTGGAGTGAACGGTACGAATCGGCTTGCCATTTTCTTTAATGGGAATATTTGTGTCTATGATGGGATTCCTGCAGAGAAGGTGCAAGAAATAATGCTTATTGCTGCTAAGTCTGCTGGAATGAAGAAGATTTCCTCACAGTCCCAATTCACTTCTCCCATTCCCACAAGGCCATCTTCTCCACAAGGAACCACTAATAATGCAGCTTCACCCCAGGCCATCTGCTTTCCTGCTCAGAAGAGTTCCATCTGCAGGTTGCAAGAATTTCCAATTGCACGCAGGCAGTCTCTTCAGCGATTCCTTGAGAAGCGTCGAGACAGGTTGGGGAGTAAAGCCCCTTATCTTACTACGCCATTTACACCAAAAGTGGCTGATAACATGGACAACAACTTCTGTGCTGAAAACTCTCCAGATTTGGTTTCCTCCAAACCAAGTATTGTTGCCTCCTG 716 0.4232 MEEKIEARVVKTEAEKFEEEGEKEQNLAPESSPVPANLGDNVDWVNNSSEKPRKMVSVGEGKETVDESAGNNLGDVSNAHFSANRPLPTSGVNGTNRLAIFFNGNICVYDGIPAEKVQEIMLIAAKSAGMKKISSQSQFTSPIPTRPSSPQGTTNNAASPQAICFPAQKSSICRLQEFPIARRQSLQRFLEKRRDRLGSKAPYLTTPFTPKVADNMDNNFCAENSPDLVSSKPSIVAS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01183 238 ProSiteProfiles Tify domain profile. 91 126 IPR010399 -
Bva05g01183 238 MobiDBLite consensus disorder prediction 135 158 - -
Bva05g01183 238 MobiDBLite consensus disorder prediction 1 26 - -
Bva05g01183 238 MobiDBLite consensus disorder prediction 1 59 - -
Bva05g01183 238 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 64 222 IPR040390 -
Bva05g01183 238 PANTHER DIVERGENT CCT MOTIF PROTEIN 64 222 - -
Bva05g01183 238 Pfam tify domain 95 125 IPR010399 -
Bva05g01183 238 SMART tify_2 91 126 IPR010399 -
Bva05g01183 238 Pfam Jas motif 179 203 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01183 Bva-Chr5 6146686 6148928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01183 96 208 Tify Gene Family AT5G20900 54.386 7.59e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva05g01183 tify 2.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01183 K13464 - gmx:100306045 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01183 05 6146686 6148928 Bva06g00453 06 5303117 5305425 BWGD