Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01160 ATGGGGCGAGAGGTTCCGaagcaacagcagcagcagcaggtAGCCTACACGGTGGATCAACTTGTCGCCGTTAATCGCTATAATCCTGATATCCTCCCCGATCTCGAAAACTATGTCCACGAACAGGTTTCCTCACAAACATACAGCCTGGATGCAAATCTTTGCCTTCTTCGCCTCTATCAGTTTGAACCAGAGAGAATGAGTTCCCAGATTGTAGCTCGCATTTTAGTGAAGGCCCTCATGGCTATGCCGGCTTCAGACTTCAGCTTGTGTCTCTTTTTGATTCCAGAACGCGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCACATTATTTGGAGACAGGGCGATTTCGACAGTTTTGGGATGAAGCTGCAAAGAGTCGTCATATAGTTGAAGCTGTGCCCGGATTTGAGCAAGCAATTCAGGGCTATGCAATTCATGTCCTTTCTTTAACTTACCAAAAGGTTCCTAGATCTGTACTTGCTGAGGCTATCAATATAGAAGGTTTATCCTTGGATAAATTCTTGGAACACCAAGTGGCCAACTCTGGTTGGGTTATTGAGATAGCGCAAGGCAGGGGTCAACTTATTGTCCTACCTAGAAATGAATACAATGACCCTGTTTTAAAGAAAAACGCTGCAGACACAGTAACATTGGAGCACATTACTCGCATCTTACCTATTCTTGGCTG 701 0.4337 MGREVPKQQQQQQVAYTVDQLVAVNRYNPDILPDLENYVHEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPASDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWVIEIAQGRGQLIVLPRNEYNDPVLKKNAADTVTLEHITRILPILG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01160 233 ProSiteProfiles PCI domain profile. 48 206 IPR000717 -
Bva05g01160 233 Gene3D ARM repeat; domain 1 7 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Bva05g01160 233 Gene3D - 129 231 IPR036388 -
Bva05g01160 233 Pfam CSN8/PSMD8/EIF3K family 68 195 IPR033464 -
Bva05g01160 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
Bva05g01160 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 11 233 - -
Bva05g01160 233 SUPERFAMILY ARM repeat 11 135 IPR016024 -
Bva05g01160 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Bva05g01160 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01160 Bva-Chr5 5998109 6000686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01160 1 233 Eukaryotic Initiation Factors Gene Family AT4G33250 74.249 9.10e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01160 K15028 - cpap:110812019 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01160 05 5998109 6000686 Bva05g01160 05 5998109 6000686 ECH