Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01157 ATGGCGAAAGGTGGGAAGCTAACCAAGCTCAAGTCAGTCCTCAAGAAATGGAACTCTTTCGGCAACAAGCAGAGCCGCTCCAGCATAAGCGCCGTCGCTGACGACGAATCTTCCTCCATTTCACGATCAGACCTCCACCCCGTTTATGTCGGAAAGTCACGACGGCGATACCTCGTAACCTCCGATGCCATTGACCACCCTCTGTTCCGCGAGCTAGTGGAGCGCTCCCGCGACTCCGAGGACGACGACACCGTCACTGTCGCATGCGAGGTTGTCCTGTTCGAACACTTGCTCTGGATGCTTGAGAATGCTGACCCGCAGCCCGAGTCACTCGACGAGCTTGTCGAGTTCTACGCTTGTTA 362 0.5608 MAKGGKLTKLKSVLKKWNSFGNKQSRSSISAVADDESSSISRSDLHPVYVGKSRRRYLVTSDAIDHPLFRELVERSRDSEDDDTVTVACEVVLFEHLLWMLENADPQPESLDELVEFYAC 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01157 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 120 IPR003676 GO:0009733
Bva05g01157 120 Pfam Auxin responsive protein 10 101 IPR003676 GO:0009733
Bva05g01157 120 PANTHER SMALL AUXIN-UP RNA-RELATED 4 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01157 Bva-Chr5 5971798 5972442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01157 6 103 Calmodulin-binding Proteins AT3G43120 25.191 3.71e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01157 - - qsu:112019930 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01157 05 5971798 5972442 Bva05g01157 05 5971798 5972442 ECH