Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01152 ATGCAAATGCATCTGAAACTAGCCTCTGCTCTCTTCGTCTTCTTCGTATTCCCAGTATTATTCTCCTGTGCCGCGGCCGCACGCAAGCACCACGAACCACGAGATCTAATCCGTTCATCATGCAGCCATGCCAGGTACCCAAGCTTATGCATTCGAACCCTCTCGCACTATGAGGGACCCGCCAAGACCCCTAAGGACCTGGCTCAAGCTGCCGTCAGGGTGAGCCTGGCTCACGCTAGAAGGGTCTCCAACTACCTGAGGAGCCAAAGCGAGAACGTGAGCAAGAGACAGCGAGTCGCGTTGAGTGACTGTGTCGAGCAATTATCTGACTCGGTGGACGAGTTGAGGAGGACTCTGAAGGAGTTGCAGCACCTGCGAATGAAGACGTTCGAGTGGCAGATGAGCAACGCCCAAACGTGGGTCAGCGCTGCTTTGACGTACGATGACACGTGCCTCGATGGGTTCGCCGGCGTTGATGGGAAGCTCAAGTTGAATGTGAAGCGTAGGATCACCAACGTAGCCAGGGTCACCAGTAACGCGCTCTACATGATCAACTGCCTTGATAATAGCCGCGGCAAGCCTCGATCCAAACCTTA 596 0.547 MQMHLKLASALFVFFVFPVLFSCAAAARKHHEPRDLIRSSCSHARYPSLCIRTLSHYEGPAKTPKDLAQAAVRVSLAHARRVSNYLRSQSENVSKRQRVALSDCVEQLSDSVDELRRTLKELQHLRMKTFEWQMSNAQTWVSAALTYDDTCLDGFAGVDGKLKLNVKRRITNVARVTSNALYMINCLDNSRGKPRSKP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01152 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 189 IPR035513 -
Bva05g01152 198 CDD PMEI-like_3 39 185 - -
Bva05g01152 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 187 IPR006501 GO:0004857
Bva05g01152 198 Pfam Plant invertase/pectin methylesterase inhibitor 35 182 IPR006501 GO:0004857
Bva05g01152 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 192 - -
Bva05g01152 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 187 IPR035513 -
Bva05g01152 198 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Bva05g01152 198 Coils Coil 105 125 - -
Bva05g01152 198 PANTHER PECTINESTERASE INHIBITOR 3 9 192 - -
Bva05g01152 198 SMART PMEI_2 32 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01152 Bva-Chr5 5941381 5942404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01152 22 190 Carbohydrate Esterase AT3G14310 31.522 5.93e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01152 - - tcc:18588233 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01152 05 5941381 5942404 Bva05g01152 05 5941381 5942404 ECH