Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01150 ATGAAGTTTCGTCTCACTGGCGGCAAGTGCCCCCTCTTAATCTGCGACTTATCTGTTCGTGGATTCTCAGCTgtaaatttccatttttatggTGTTGAGGTTATTCCAATGGAAACCAAGTTCGCAGCTTTGCAGTTTGTTCTCCTTCTGGTTGCTTTACTTGTTGTCCATGTTCGCCCCTCCAATGtgacAATTAATGAGACTTGTGGCGACTTTGTTGGTTCTCAGATTAGACGCAGTGGAgcACCATGCCCTACCGGTTGGGTTATTGGCCCTAATAAAACCAAGTGCTATTGCTTTGTTGGGAAACCTCAATCTTGGAATGAGTCAGAGACTTGTTGTAGTAAATATGGTGGACATTTAGCAGCATTGGTATCACCTCAGGAACTATCCTTTGCTCATAGTCTATGTAATGATACAACTAATAGTTGCTGGGTTGGAGGAAGAAGACTCAACTCTACCGCCAGTCATGGGTGGACATGGTCTGACAATTCTCAGTGGAACGGTTCCATGTTTCCTTCGGAACCTTTTCAATCCCATTGTTCTGGACTATCCTGCCACATGAACAACTCCTCTAATTTATGTGCAATGATTGATAATTCAAGATCTGTCATGAGTGACAGTTGCGACAGTTCTCATGCCTCTATATGTGCTCTTGATATAGGCATGAAATGTTACCACTTGCACTGCCACAGGGAATACTTTATCATCCTTGCAGTGGTGAGTACATTAATCCTCTGCACAACATTAGTGGTAGTGGTTTGGCTTCTTGTATATAAGCGGAGCAAGAAGAGAAGACGATCCAGAAAACTATCTAATTCAGCAGCTTCTCAGTTAGTTCCTCCATCATGGAAAGTATTTACTAAAGAGGAACTAAGGTCAACTACGAAGAACTTCAGTGAAGGTAACCGTCTTGTTGGGGACACCAAGACTGGTGGTACGTACAGTGGAGTCCTACCTGATGGCTCAAGAGTCGCAGTTAAGAGATTAAAGAGGTCAAGCTTTCAGAGGAAAAAGGAATTCTATTCTGAAATTGGTAGGGTTGCTAGGCTTCACCATCCAAATCTGGTGGCTGTGAAGGGGTGCTGCTATGATCACGGTGACCGCTACATTGTTTATGAGTTTGTAGCAAATGGGCCCTTAGATAAATGGCTATACCATATACCAAAAGGAGGTCGGAGCTTAGATTGGGCCATGAGGATGAAAATTGCCACCACACTTGCTCAAGGAATAGCGTTTCTACATGACAAGGTGAAGCCACATGTTGTGCACCGGGATATACGTGCTAGCAATGTACTTCTGGATGAAGAATTTGGAGCTCATCTTATGGGTGTTGGTCTATCCAAGTTCGTGCCATATGAAGTGATGCATGAGAGGACGGTGATGGCCGGAGGAACTTACGGATATCTTGCTCCAGAATTTGTGTACAGAAACGAGATTACAACAAAGAGTGATGTCTACAGTTTTGGTGTGCTTTTACTTGAAATAGTTAGTGGACGTAGACCTGCACAAGCAGTTGATTCAGTGGGTTGGCAGAGTATATTTGAATGGGCCACACCTCTCGTGCAAGCTCACCGTTATGTTGAACTCTTGGATCCTCATatatcttcatcatcatcttctaaCATCCCAGAGGCCAGTACCATTCAGAAGGTTGTTGACCTCGTCTATTCTTGCACTCAACATGTCCCTTCTATGCGTCCTAGGATGTCTCATGTCGTTCATCAATTGCAACAGCTTGCCCAGCCTCAGGTAAAGTA 1760 0.4313 METKFAALQFVLLLVALLVVHVRPSNVTINETCGDFVGSQIRRSGAPCPTGWVIGPNKTKCYCFVGKPQSWNESETCCSKYGGHLAALVSPQELSFAHSLCNDTTNSCWVGGRRLNSTASHGWTWSDNSQWNGSMFPSEPFQSHCSGLSCHMNNSSNLCAMIDNSRSVMSDSCDSSHASICALDIGMKCYHLHCHREYFIILAVVSTLILCTTLVVVVWLLVYKRSKKRRRSRKLSNSAASQLVPPSWKVFTKEELRSTTKNFSEGNRLVGDTKTGGTYSGVLPDGSRVAVKRLKRSSFQRKKEFYSEIGRVARLHHPNLVAVKGCCYDHGDRYIVYEFVANGPLDKWLYHIPKGGRSLDWAMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNEITTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYVELLDPHISSSSSSNIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLAQPQVK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01150 550 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 546 - -
Bva05g01150 550 Pfam Protein tyrosine and serine/threonine kinase 285 541 IPR001245 GO:0004672|GO:0006468
Bva05g01150 550 SMART tyrkin_6 273 541 IPR020635 GO:0004713|GO:0006468
Bva05g01150 550 ProSitePatterns Tyrosine protein kinases specific active-site signature. 386 398 IPR008266 GO:0004672|GO:0006468
Bva05g01150 550 CDD CLECT 60 181 - -
Bva05g01150 550 SUPERFAMILY Protein kinase-like (PK-like) 238 541 IPR011009 -
Bva05g01150 550 SMART CLECT_2 48 182 IPR001304 -
Bva05g01150 550 Gene3D Phosphorylase Kinase; domain 1 238 339 - -
Bva05g01150 550 Gene3D - 26 184 IPR016186 -
Bva05g01150 550 SUPERFAMILY C-type lectin-like 37 184 IPR016187 -
Bva05g01150 550 ProSiteProfiles C-type lectin domain profile. 57 182 IPR001304 -
Bva05g01150 550 PANTHER - 1 546 - -
Bva05g01150 550 ProSiteProfiles Protein kinase domain profile. 264 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01150 550 Pfam Lectin C-type domain 68 181 IPR001304 -
Bva05g01150 550 Gene3D Transferase(Phosphotransferase) domain 1 340 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01150 Bva-Chr5 5922263 5926069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01150 78 547 Receptor kinase-like Gene Family AT1G52310 70.378 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Bva05g01150 PK_Tyr_Ser-Thr 7.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01150 - - vra:106762676 821.231