Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01145 ATGGTGAAGAAGACAGTGGAAAAGCCCGCCGAGCGAAGCGATTTCAAGTACAAGGGTGTCCGCAAGAGAAATTGGGGCAAATGGGTATCCGAAATTAGACTACCAAACAGCAGGGAGAGGATTTGGTTGGGATCTTATGACTCCGCCGAGAAGGCGGCGCGTGCTTTCGACGCTGCCATGTTTTGCTTACGTGGACGTTCGGCTAAGTTTAATTTCCCCGATAACCCACCTGATATCGCCGGAGGTAGGTCTTTAACCCCTTCTCAAATTCAGGCTGCTGCGGCTCAATTCGCAAATTTGGAGCCCCGTATGAGCCAGTCCGGTGGCTCCGTGAAAAGTGAATTGCCAATGGAATCTTCTACTTTCCTTTCGGAGGGGATTGTTCCGCACGCGGAATCCCCTTCCGATTCCTTCTCCGACTGTACGGTCCAAACGGATAGCGACGTCACCCTAAACGGGTCGTTTTCGGATTTATTTACCTCATTGGAGTCGGGTAATTTTGCATCCGAATATGGGATTTTCCCGGGTTTTGATGATTTGAGCAGTGATTACTACATACCGACAATGTCAGCGGTTGATTATggagaagaaaacatggaaggGTTGATAGTTCAAGACTCATTCCTGTGGAATTTCTG 638 0.4749 MVKKTVEKPAERSDFKYKGVRKRNWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAAMFCLRGRSAKFNFPDNPPDIAGGRSLTPSQIQAAAAQFANLEPRMSQSGGSVKSELPMESSTFLSEGIVPHAESPSDSFSDCTVQTDSDVTLNGSFSDLFTSLESGNFASEYGIFPGFDDLSSDYYIPTMSAVDYGEENMEGLIVQDSFLWNF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01145 212 SUPERFAMILY DNA-binding domain 16 74 IPR016177 GO:0003677
Bva05g01145 212 Pfam AP2 domain 16 65 IPR001471 GO:0003700|GO:0006355
Bva05g01145 212 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Bva05g01145 212 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Bva05g01145 212 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Bva05g01145 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017-LIKE 8 212 - -
Bva05g01145 212 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Bva05g01145 212 Gene3D AP2/ERF domain 16 74 IPR036955 GO:0003700|GO:0006355
Bva05g01145 212 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Bva05g01145 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01145 Bva-Chr5 5890104 5891113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01145 16 212 AP2-EREBP Transcription Factor Family AT1G19210 50.000 8.51e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva05g01145 AP2 4.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01145 - - gmx:732656 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01145 05 5890104 5891113 Bva05g01145 05 5890104 5891113 ECH