Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01138 ATGGCCGCTGTTCGTTTCCTTCTCTTAcctttcttcctcctcttactttctctttctccttcttctctgTCCCAACAAGAGAACGAGGCCCTTCTCAAGCTAAAGCAATCTTTCAACAACCCAGCTTCTTTATCTTCTTGGGTTCCAAACTCGTCTCCTTGCGTAGACAAGTGGGCGGGGATCATTTGCCTCAACAACATCATCACGGGTCTTCACCTCACCAACTTCGGTCTCTCTGGGAAGATCGACATACAAGCTCTTCTGGAAATTCGTGGTCTTCGAACTCTCAGCCTCGTGAATAACTCCTTCTCAGGTCCAATGCCAGAGTTCAACAAGCTCGGTGCTTTGAAGACTCTGTTATTAACAGGGAATCAATTCTCTGGGCCCATTGCTGCAGATTTCTTCTCCACATTGGAttcattgaagaaaatatggaTATCTAGTAACAAGTTCTCGGGAAATTTGCCTGCGACCTTGACCGAGCTGGAGTTTCTTATAGAATTGCACGTAGAGAACAACGAATTCTCAGGACCAATTCCAGATATGAAGCAAAACCTTAAATCAGTGGACTTTTCCAACAACAAATTCGAAGGTCAAATCCCAGAGGGCATGGCTAAGTATGGGAATTCGTTTGCAGGAAACGAAGGGCTTTGTGGGAAACCTCTGGCAAAGGCTTGTAACCAACCGCAGACtgagatgaaagaaaacaattggATGATGAAGGCCATTGTGGCGCTCACTGTTTTTATTGCTCTGGCTGCGCTTTTCCTATTGATCAAGCCGAAGCGTCAAGACGATGACTTCGTTGTgcttgagaaagaaagaaagaacaacgAGGTGGTTCAAGTGCACGTGCCTGGCTCAAACCATACGAAGCGATCGGAATCGGGCAGAAAAGGTGGCGATTCCAAGAGGGGTTCGAGGAATGGCATGGGTGACCTTGTGATGGTGAACGATGGAAAGGGTGTGTTTGGGTTGCCGGATTTGATGAAGTCTGCTGCAGAGGTTTTAGGAAATGGTGGAATGGGTTCGGCCTATAAAGCTGCCATGGCCAATGACTTGTCCGTGGTGGTCAAGAGAGTGAGGGAGATGAATAAACTTAATAGAGATGCATTTGATGCTGagataagaaaatttggaagaaTCAAACACGCCAATATCTTGACGCCTTTGGCTTACCTCTACCGCAGAGAGGAGAAGCTAGTTGTCTCAGAGTACGTTCCCAAAGGCAGCTTGCTGTACGTCTTGCATGGTGATAGAGGAGCCTCTCATGCTGACCTGAACTGGCCTACCCGTCTAAAGATCGTGCAGGGAATTGCTCGAGGATTGGCTTTCCTTCATTCTGAATTTGATTCCTATGACCTTCCCCATGGGAATCTCAAGTCAAGCAATGTTCTACTGGGAAATGATTATCAGCCACTTCTAAATGACTATGCCTTTCAACCACTAATGAACCCCAACACTGCTGTGCAGGCAATGTTTGCCTTCAAAACACCAGATTACACACAGTACCAGCAAGTTTCACACAAGACTGACGTCTATTGTTTCGGAATCATCATCCTCGAAATGATTACCGGAAAATTCCCATCTCAGTATCACAGCAATGGCAAGGGTGGGACTGATGTTGTGGAGTGGGTGTTCTCAGCGATTTCCGAGAGAAGAGACGCAGAAGTGATTGATCCAGAGATAGCAAGTAATGCAGGTTCTTCACTGAATCAAATGCTGCAACTTCTCCAAATAGGGGCTGCCTGCACTGAGAGCAATCCTGAACAAAGAATTGACCTGAGGGAAGCCATTAGGAGGCTAGGGGAGGTACAGGTTTA 1823 0.4377 MAAVRFLLLPFFLLLLSLSPSSLSQQENEALLKLKQSFNNPASLSSWVPNSSPCVDKWAGIICLNNIITGLHLTNFGLSGKIDIQALLEIRGLRTLSLVNNSFSGPMPEFNKLGALKTLLLTGNQFSGPIAADFFSTLDSLKKIWISSNKFSGNLPATLTELEFLIELHVENNEFSGPIPDMKQNLKSVDFSNNKFEGQIPEGMAKYGNSFAGNEGLCGKPLAKACNQPQTEMKENNWMMKAIVALTVFIALAALFLLIKPKRQDDDFVVLEKERKNNEVVQVHVPGSNHTKRSESGRKGGDSKRGSRNGMGDLVMVNDGKGVFGLPDLMKSAAEVLGNGGMGSAYKAAMANDLSVVVKRVREMNKLNRDAFDAEIRKFGRIKHANILTPLAYLYRREEKLVVSEYVPKGSLLYVLHGDRGASHADLNWPTRLKIVQGIARGLAFLHSEFDSYDLPHGNLKSSNVLLGNDYQPLLNDYAFQPLMNPNTAVQAMFAFKTPDYTQYQQVSHKTDVYCFGIIILEMITGKFPSQYHSNGKGGTDVVEWVFSAISERRDAEVIDPEIASNAGSSLNQMLQLLQIGAACTESNPEQRIDLREAIRRLGEVQV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01138 607 Gene3D Ribonuclease Inhibitor 25 135 IPR032675 -
Bva05g01138 607 Pfam Protein kinase domain 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01138 607 ProSiteProfiles Protein kinase domain profile. 331 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01138 607 Gene3D Phosphorylase Kinase; domain 1 331 406 - -
Bva05g01138 607 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Bva05g01138 607 MobiDBLite consensus disorder prediction 291 306 - -
Bva05g01138 607 PANTHER LRR RECEPTOR-LIKE KINASE 6 607 - -
Bva05g01138 607 SUPERFAMILY Protein kinase-like (PK-like) 335 602 IPR011009 -
Bva05g01138 607 MobiDBLite consensus disorder prediction 284 311 - -
Bva05g01138 607 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 607 - -
Bva05g01138 607 Gene3D Ribonuclease Inhibitor 136 229 IPR032675 -
Bva05g01138 607 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Bva05g01138 607 SUPERFAMILY L domain-like 24 207 - -
Bva05g01138 607 Gene3D Transferase(Phosphotransferase) domain 1 407 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01138 Bva-Chr5 5855156 5857609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01138 1 607 Receptor kinase-like Gene Family AT3G42880 51.101 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva05g01138 Pkinase 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01138 - - gmx:100788667 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01138 05 5855156 5857609 Bva06g00500 06 5629836 5632556 BWGD
Bva05g01138 05 5855156 5857609 Bva05g01138 05 5855156 5857609 ECH