Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01131 ATGGCGTCTACTAGGATCGGGCTTGCAGCCGACAATACCCTCCAGTCTATATGCTACAAGCGTGGTTCGCTTCAGCTACTTGATCAGAGAAAGCTCCCCCTGGAAACAATTTACCTGGAAATTCAGAATTCAACGGATGGGTGGAATGCCATACGGGATATGGTGGTGCGGGGGGCACCTGCTATTGCCATTGCAGCAGCGCTTTCTTTGGCTGTAGAAGTGTTTAATTTGGAGGAATTTAATGGTTCACCTGCTGATGCTTCGCCCAACGCAGTGAACCTTTCAGATGCAGCAACACGACTCAAAGAAGTTATATTAAATGCTGCTGCTACCACTTCAGAGGCAAGGAGTGTTTTCCAGGCATTTATCGAAGCTGCGGAAATTATGCTCGAGGATGACGTGGCCTCAAATAAAGCAATTGGCTCTTATGGAGCTAGTTTTCTTCAGCAACATTCAGAGAAACCAAAGTTTTCTGTTTTGACACATTGCAACACAGGAAGTCTTGCCACAGCTGGATATGGTACTGCTCTGGGTGTAATCCGTGCACTTCACAGTGCGGGAGTTTTAGAAAGGGCTTATTGCACAGAAACACGTCCATTCAACCAAGGATCACGACTTACGGCATTTGAATTGGTACATGAGAAGATACCGGCAACCCTTATAGCAGATTCTGCTGTAGCTGCATCAATGAAAGCTGGACGTGTAGATGCTGTTGTTGTAGGAGCAGACCGTGTTGCTTCCAATGGCGATACAGCCAATAAAATTGGAACCTATAGTGTTGCCTTATGCGCCAAGTTTCATACTGTGCCTTTTTATGTGGCTGCACCCCTAACGTCGGTGGATCTTTCACTTTCTTCCGGACAAGAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAACTCACATGGAGGACTTGGAGAGCAAATTGCTGCCTCTGGAATTTCTGTGTGGAACCCAGCTTTTGATGTTACACCTGCTAATCTTATATCAGGGATCATAACAGAGAAGGGTGTCATTACAAAAGCTGATGCTGATACCTTTGACATAAAGCTTTCGTACAAAAGATTGGTAACCAGGCCTAGGTA 1091 0.4555 MASTRIGLAADNTLQSICYKRGSLQLLDQRKLPLETIYLEIQNSTDGWNAIRDMVVRGAPAIAIAAALSLAVEVFNLEEFNGSPADASPNAVNLSDAATRLKEVILNAAATTSEARSVFQAFIEAAEIMLEDDVASNKAIGSYGASFLQQHSEKPKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAVAASMKAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHTVPFYVAAPLTSVDLSLSSGQEIVIEERSPKELLNSHGGLGEQIAASGISVWNPAFDVTPANLISGIITEKGVITKADADTFDIKLSYKRLVTRPR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01131 363 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 345 IPR037171 -
Bva05g01131 363 Gene3D - 12 189 IPR027363 -
Bva05g01131 363 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 343 IPR011559 GO:0044249
Bva05g01131 363 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 IPR005251 -
Bva05g01131 363 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 12 352 - -
Bva05g01131 363 Gene3D - 190 355 IPR042529 -
Bva05g01131 363 Pfam Initiation factor 2 subunit family 86 342 IPR000649 GO:0044237
Bva05g01131 363 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 12 352 - -
Bva05g01131 363 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 15 343 IPR005251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01131 Bva-Chr5 5821563 5824663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01131 53 360 Eukaryotic Initiation Factors Gene Family AT2G05830 74.923 2.45e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01131 K08963 - gmx:100799311 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01131 05 5821563 5824663 Bva05g01131 05 5821563 5824663 ECH