Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01130 ATGGCAGTTTCTGGGTCAGAATCTCAGACACCGACCAGCAAAACGGTTCCTCAGGTCGAGGTCGAGTGCGTCAAATGTGATTCTTGTGGGTTCACCGAGGAATGCACACCTGCGTACATTTCTCGGCTGCGTCAGAGGTACCAAGGACGCTGGCTGTGTGGGCTCTGCGTAGAAGCTGTGAAGGACGAGGTGATAAGATCAGATACGCTTATCTCCATCGAAGAAGCTCTGAACCGCCATATCAGTTTCTGCAGAGAGTTCAGATCATCAAGCGCTGTCAAGAAAACAGAGCACCCCATCTTCGCTATGGGACGGATTCTTCGCCGGAGCTTGGATTCTCCGAGAACTCTCCGATCAACTTCAAGCGGGTGTCTTCCAATCGTTGATGGGGTCCGAACTTCAGCTCTGCTTCGATCAGAAAGTTGCTTCTCGTCTCTTTCTCGTTG 446 0.5157 MAVSGSESQTPTSKTVPQVEVECVKCDSCGFTEECTPAYISRLRQRYQGRWLCGLCVEAVKDEVIRSDTLISIEEALNRHISFCREFRSSSAVKKTEHPIFAMGRILRRSLDSPRTLRSTSSGCLPIVDGVRTSALLRSESCFSSLSR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01130 148 Pfam Protein of unknown function (DUF1677) 21 109 IPR012876 -
Bva05g01130 148 PANTHER DUF1677 FAMILY PROTEIN 1 147 - -
Bva05g01130 148 PANTHER OS01G0745000 PROTEIN 1 147 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01130 Bva-Chr5 5816440 5818309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01130 - - gmx:100800301 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01130 05 5816440 5818309 Bva10g00491 10 4818575 4819380 ECH
Bva05g01130 05 5816440 5818309 Bva06g02292 06 14873475 14874659 ECH
Bva05g01130 05 5816440 5818309 Bva05g01130 05 5816440 5818309 ECH