Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01121 ATGAAAATTATACTGCAATCGATCCTGCCCAGTTGTTTTAAGGGTGGTGAGTATCCGTCGCCACCACCCAAGAAAGAGGCGGCGCCGGCAAAGCAATCTTCCTTGAAGAGGGTGTCTGTGTCGGATTTGAGTTTTCCGAGTACAACGTTGTCCGAGGACTTGTCGGTGTCTCTTGTAGGATCTAACCTGCATTCCTTTACACTTGCCGAGCTCAAGATTATCACGCAGAACTATTCTTCGAGTAACTTTCTTGGAGAAGGTGGATTTGGTCCTGTTCACAAGGGTTTCATCGATGATAAGCTGAGGCCTGGTCTTCAGGCTCAGCCCGTTGCTGTTAAGCTATTGAACTTGGATGGCTCCCAAGGCCATAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAACTGAGGCATGAGCACCTTGTCAAGCTCATAGGATATTGCTGTGAAGAAGAACACAGACTACTGGTTTATGAGTACTTGCCAAGAGGCAGCTTAGAGAATCAACTATTCAGAAGGTATTCGATGTCTTTGCCTTGGTCAACTAGAATGAAGATTGCAGTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCACGAAGCAGATAAGCCAGTCATCTATAGAGATTTCAAAGGTTCAAACATCCTATTAGATACTGATTACAATGCAAAACTCTCTGATTTTGGGTTGGCAAAAGATGGCCCCGAAGGAGATGACACCCACGTCTCAACCCGAGTCATGGGCACCCAAGGCTATGCTGCCCCAGAATATGTCATGACAGgTCACTTGACTCCAATGAGTGACATATATAGTTTTGGAGTTGTTCTACTAGAGCTGCTGACAGGGAGAAGGTCAGTGGACAAAAGCAGGTCCGCAAGAGAGCAAAACTTGGTGGAATGGGCGAGGCCAATGTTAAATGATTCAAGAAAACTGGCTCGAATCATGGACCCAAAGCTCGAAGGACAGTACTCAGAAAGTGGGGCAAAAACAGCAGCTGCATTGGCTTATCAGTGCCTGAGCAACAGGCCAAAGAGCAGACCCACAATGAGCACAGTGGTTAAGACTCTGGAGCCACTCCAAGATTACCAAGAGATTCCAATTGGCACCTTTGTCTTCACGGTCCCACCAGATAATACTGACAATTCACAGAAAGAATGCGAGGCACCAACgccaaaggaaaggaagaaagaaagcagtGGGCGGCACCATCAGAGTCACAGAAGCAATGGGCATAGCCGTAGGCACCACCAGCATCCATTGAGATCGCCAAAATCACCAAGTGACAGAAGCAGATCCAACTCCCCTCCTTTGCCAGAGCAAAGCGAAGGAcatgcaaatta 1337 0.46 MSDIYSFGVVLLELLTGRRSVDKSRSAREQNLVEWARPMLNDSRKLARIMDPKLEGQYSESGAKTAAALAYQCLSNRPKSRPTMSTVVKTLEPLQDYQEIPIGTFVFTVPPDNTDNSQKECEAPTPKERKKESSGRHHQSHRSNGHSRRHHQHPLRSPKSPSDRSRSNSPPLPEQSEGHAN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01121 181 MobiDBLite consensus disorder prediction 106 181 - -
Bva05g01121 181 MobiDBLite consensus disorder prediction 161 181 - -
Bva05g01121 181 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Bva05g01121 181 SUPERFAMILY Protein kinase-like (PK-like) 2 114 IPR011009 -
Bva05g01121 181 MobiDBLite consensus disorder prediction 134 155 - -
Bva05g01121 181 Pfam Protein tyrosine and serine/threonine kinase 2 91 IPR001245 GO:0004672|GO:0006468
Bva05g01121 181 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g01121 181 PANTHER OS01G0588500 PROTEIN-RELATED 1 146 - -
Bva05g01121 181 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01121 Bva-Chr5 5772371 5774655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01121 2 94 Receptor kinase-like Gene Family AT3G58690 52.688 3.48e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva05g01121 PK_Tyr_Ser-Thr 3.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01121 - - gmx:100797003 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01121 05 5772371 5774655 Bva05g01121 05 5772371 5774655 ECH